AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCATACAATGTATCTTGATCACACTTTGCCCACTTGTCTCTCCAA
CTTTGCCCAATTTTACCTTACCCTACCGTAGCCTTCCTGTCCTGCTGTTT
TCCTTTAGAATGGACTATGTCAGAGCATATGTCCCTATGATTTGGCTCTT
ACAGACTTTCTGCCCCTCGTCTGTGATCTTTCATTGAGATTTAAGTGTAG
AAGTTGTATAATAATGGTATTATTCAGGGGCAGACACTGCAAAGTTAGTT
GATCGCCTAATCTGACCAGTTGTCTCTTTTTGTTGGAAAATGAAGGGTCT
TGGGTGAGATCTACACATATATTTGTGGTTATAAGGACAGATGCTTACAG
TGCAGTTAGCAATTTCCTGGTTTAAGAAAGTAGCAGTAGTAGAACTACCT
CTAATTCCATTGGTTCACCAGTCATAGGTACTTGGCTAAATTTGCAGTTC
CATGGCATAATTTCTCTTTTATGGAGCAGGCCTTAAGTCCAACTAGGTAA
CTGTTGATTCCTCACAGGAAATAAGTGCCACAATTCAACTTTTCCTTCTG
TATTAAGCTGCTGTGACCACAATTTTTCATTTTTATGTAAGTTTGTACTC
CTTGTGAATTTCTACAGGATGATTGTGTAGGACTGCAAGTGTTATGCACT
GAATTAGTAGGGAAGCTTGCTTNCAGTTTAAGAGCACCAGACTTTCTTTC
TAGAAAGCTAACTGTTTTTCTCAT

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTGATAGGGGAATCTTTAAAGAAATA
TTCAATTTCCTTAGTCAACAGTGAAATGAAAATCTAAATGACACTGAGAG
ACCATTTTAGATCTGTCAGAATGTCTAAGTTCAAAAGCCCATAAAAAGGC
GGGCTTAAGAGGGGATGCTTGAATTTACTGAGAAGGAGAAATAAAATAGC
CATTGGGTGTGGTTGGAGGGAAGGAATCCTGTGATAGATGGGAGAGGAAA
GTAACAGGAGAGTTCAAGTATGGGGAGGACAGGGGGAGAGAGAACTGTAA
TCAGTAGGAGGGGCATCTTTTGGATGAGCTAGAAACCTAGAACACTGGAA
ATCCTCAGGCATCTAAGAAGATAACCCTAGCTAAGCTGCTAGCAATAGGG
AACAGTGAACATGACATGGCCATCTCCTGTAACTAGGCAAACTTTCCAAT
GATGGAATGGGGACACCAACAGAGCCACAAACACTTTGACCCACAATTTA
TTCTGTTTATAAGATTCACAGGGATAAAAGAGGAGCAGAAATAGAAGGAA
TGGCCAACCGATTAATTGCCCAACTGAGACCCATAGCATACGAGATAGTT
TGCCTCTGATACTAGTAATGATATTCTGCTATACTTGCAGATAGGATCCT
AGTATAACTGTCATCTGAGATGCTTCACCAAGAAGCTGAATTATACAGAT
GTACAGTCCTACTGGAAAACTTATGTGGAGCTCAGG

Query= MSMg01no497_f17.b1 MSMg01no497_f17.b1 CHROMAT_FILE:
MSMg01no497_f17.b1 PHD_FILE: MSMg01no497_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:01 2005
         (675 letters)



>mm_chr6_44512900_44513974
          Length = 1075

 Score = 1237 bits (640), Expect = 0.0
 Identities = 664/672 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccatacaatgtatcttgatcacactttgcccacttgtctctccaactttgccca 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatacaatgtatcttgatcacactttgcccacttgtctctccaactttgccca 263

                                                                       
Query: 64  attttaccttaccctaccgtagccttcctgtcctgctgttttcctttagaatggactatg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attttaccttaccctaccgtagccttcctgtcctgctgttttcctttagaatggactatg 323

                                                                       
Query: 124 tcagagcatatgtccctatgatttggctcttacagactttctgcccctcgtctgtgatct 183
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcagagcatatgtccctatgctttggctcttacagactttctgcccctcgtctgtgatct 383

                                                                       
Query: 184 ttcattgagatttaagtgtagaagttgtataataatggtattattcaggggcagacactg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcattgagatttaagtgtagaagttgtataataatggtattattcaggggcagacactg 443

                                                                       
Query: 244 caaagttagttgatcgcctaatctgaccagttgtctctttttgttggaaaatgaagggtc 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 caaagttagttgatcgcctaatctgaccagttgtctctttttgttggaaaataaagggtc 503

                                                                       
Query: 304 ttgggtgagatctacacatatatttgtggttataaggacagatgcttacagtgcagttag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 504 ttgggtgagatctacacatatatttgtggttataaggacagatgcttacagtgcagttaa 563

                                                                       
Query: 364 caatttcctggtttaagaaagtagcagtagtagaactacctctaattccattggttcacc 423
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 564 caatttcctggtttaagaaagtagcagtagtagtactacctctaattccattggttcacc 623

                                                                       
Query: 424 agtcataggtacttggctaaatttgcagttccatggcataatttctcttttatggagcag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtcataggtacttggctaaatttgcagttccatggcataatttctcttttatggagcag 683

                                                                       
Query: 484 gccttaagtccaactaggtaactgttgattcctcacaggaaataagtgccacaattcaac 543
           |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 684 gccttaagtccaactaggtaactgatgattcctcacaggaaataagtgtcacaattcaac 743

                                                                       
Query: 544 ttttccttctgtattaagctgctgtgaccacaatttttcatttttatgtaagtttgtact 603
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 744 ttttccttctgtattaagctgctgtgaccacaattttacatttttatgtaagtttgtact 803

                                                                       
Query: 604 ccttgtgaatttctacaggatgattgtgtaggactgcaagtgttatgcactgaattagta 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 804 ccttgtgaatttctacaggatgattgtgtaggactgcaagtgttatgcactaaattagta 863

                       
Query: 664 gggaagcttgct 675
           ||||||||||||
Sbjct: 864 gggaagcttgct 875


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)