NNAAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCATCTTTTGCAACCTGAACAGCTGAGAAGAACCTAAAGAA
ATGTTCAACATCCTTAGTCATCAGGGAAATACAAATCAAAACAATTCTGA
GATTCCACCTCTCACCAGTCAGAATGGCTAAGATCAAAAACTCAGATAAC
AGCAGATGCTGTCAAGGATGTGGAAAAAAGAGGAACACTCCTCCACTGCT
TGTGGAATTGCAACCTGGTACAACCATTCACTGTGGCGGTTCCTCAGAAA
TTGGACATAAGATTACCTGAGGACCCATCTATACCACTTCTGTGCATATA
TCCAAAAGATGTTCCAACATATAACAAGGATATGTATAACAAGGCCTTAT
TTATAATGGCCAGAAGCTGGAAACAACCCAGATGTCCTTCAACAGAAGAA
TGGATACAGAAAATGTGGTACATTTACAAAATGGAGTACTACGCGCAGCT
ATTAAAAACAATGACTTCATGAACTTCTTAGGCAAATGGCTGGGTCTGGA
GGATATCATCCTGAGAGACGTAATCCAGTCCCAAAAGAACACACAAGGTA
TGCACTCACTGATAAGTGGTTATTAGCCCAAAATCTTGGAATAACTAAGA
TGCAATTTACAGACCACATGAAGCTCATGAGAAAGGAAGACCAAAGAATA
GGTCCTTTGGTCTTTTCTCGAACGGGTAACAAAATACTCGATGGAGGGAA
TACAGAGACAAAATGCGGACAAAGACTGAAG

NACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGAACTTGGAAGAGGAATT
AGGTTAGAATGATGGCTTGCTTTCTGGCTTCCTCCTCAAGCTTATGCTTA
GGTAGCTGTTTTATACAGCCAAGGAACACCTGCCTAGGGACGATGTCTTC
CACAGTGTTGAGTCAGTACTGCATCAATTGATCCCATGGCCATGATTGTT
GTTGCAGGCATCCTCAAAGGCCTGTTTGATCAAGGCAATTCTTCAGTCAA
TGATCTCCTATCATACAACTCCATTCTGTGTGAAGTTAACAGTGAAAGCT
AGGGACAACATAGCTCCAAAATTCTGCTATAGTTTGGATCTGGAATGTTC
TCCAAATACACAAGTGTTAAAGGGGTTCTCTTACTTTGCATTGATTCTAT
TACAAGGTGAAAAAGAAAAGAAAAGAAAACTGCCAAAACTATGGCTTCAG
AGGAAGAATTAGATTCCCTGGGGCAAGGCTTAAAGATATAGAACACCAAT
GTCTCTCACCACTCTCTTTCTTTTTTCTGTACCCAGGAAAACTACTAGGC
TGTATTTTACCTTGCATTCATACCATGATCACCTGCCATATTCTCACTTA
AAATATTAGGACCAAACAACTCTAAATGTCAGCCAAATTAATTTTTCTTT
TTTGTTAAGTTTATTACTTCAGTTATTGTGTTATAGTGGTGGAAAAGTGA
CTAATGCAAACCCTN

Query= MSMg01no498_d16.g1 MSMg01no498_d16.g1 CHROMAT_FILE:
MSMg01no498_d16.g1 PHD_FILE: MSMg01no498_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:10 2005
         (596 letters)



>mm_chr6_64057668_64058663
          Length = 996

 Score =  975 bits (504), Expect = 0.0
 Identities = 519/524 (99%)
 Strand = Plus / Minus

                                                                       
Query: 73  tagctgttttatacagccaaggaacacctgcctagggacgatgtcttccacagtgttgag 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 tagctgttttatacagccaaggaacacctgcctagggacgatgtcttccacagtgttgag 937

                                                                       
Query: 133 tcagtactgcatcaattgatcccatggccatgattgttgttgcaggcatcctcaaaggcc 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 tcagtactgcatcaattgatcccatggccatgattgttgttgcaggcatcctcaaaggcc 877

                                                                       
Query: 193 tgtttgatcaaggcaattcttcagtcaatgatctcctatcatacaactccattctgtgtg 252
           ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 876 tgtttgaccaaggcaattcttcagtcaatgatctcctatcatacaactccaggctgtgtg 817

                                                                       
Query: 253 aagttaacagtgaaagctagggacaacatagctccaaaattctgctatagtttggatctg 312
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 aagttgacagtgaaagctagggacaacatagctccaaaattctgctatagtttggatctg 757

                                                                       
Query: 313 gaatgttctccaaatacacaagtgttaaaggggttctcttactttgcattgattctatta 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gaatgttctccaaatacacaagtgttaaaggggttctcttactttgcattgattctatta 697

                                                                       
Query: 373 caaggtgaaaaagaaaagaaaagaaaactgccaaaactatggcttcagaggaagaattag 432
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 caaggtgaaaaagaaaagaaaagaaaactgccaaaactatggcttcagaggaagaattag 637

                                                                       
Query: 433 attccctggggcaaggcttaaagatatagaacaccaatgtctctcaccactctctttctt 492
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 636 attccctggggcaaggcttaaagatatagaacgccaatgtctctcaccactctctttctt 577

                                                                       
Query: 493 ttttctgtacccaggaaaactactaggctgtattttaccttgcattcataccatgatcac 552
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttttctgtacccaggaaaactactaggctgtattttaccttgcattcataccatgatcac 517

                                                       
Query: 553 ctgccatattctcacttaaaatattaggaccaaacaactctaaa 596
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctgccatattctcacttaaaatattaggaccaaacaactctaaa 473


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space:   577796
Effective search space used:   577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)