Query= MSMg01no499_h18.b1 MSMg01no499_h18.b1 CHROMAT_FILE:
MSMg01no499_h18.b1 PHD_FILE: MSMg01no499_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:52 2005
(647 letters)
>mm_chr6_54618772_54619818
Length = 1047
Score = 1189 bits (615), Expect = 0.0
Identities = 637/645 (98%), Gaps = 2/645 (0%)
Strand = Plus / Minus
Query: 3 ggaattctaactggtttgcaacaggtctagacctgtatagggaagatatgcgcaccattc 62
|||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 747 ggaattctaactggcttgaaacaggtctagacctgtatagggaagatatgcacaccattc 688
Query: 63 cctgcagggtagatccatactgatgaggtcagaacctctgggagcagcagtttgggatct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 cctgcagggtagatccatactgatgaggtcagaacctctgggagcagcagtttgggatct 628
Query: 123 tagacactgcttctttattgatttcaaaattgaaacagcatctgctctgagatgtgcgtc 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gagacactgcttctttattgatttcaaaattgaaacagcatctgctctgagatgtgcgtc 568
Query: 183 tgaaaagagaggcaatgattaagccatgaacgagagcagtcaattcattgtccaggcaag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgaaaagagaggcaatgattaagccatgaacgagagcagtcaattcattgtccaggcaag 508
Query: 243 aagcctctataaaccataaactgttcatcctgtcggtgcagtccctctggagtctgtttc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aagcctctataaaccataaactgttcatcctgtcggtgcagtccctctggagtctgtttc 448
Query: 303 tgaccagggtcagaaacacagaagtggatattttcctgatacacactgtgagtgactacc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tgaccagggtcagaaacacagaagtggatattttcctgatacacactgtgagtgactacc 388
Query: 363 ccttgggaccagcttcccagggaaggaaatggaaacacatcttggtccacagagaggtac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccttgggaccagcttcccagggaaggaaatggaaacacatcttggtccacagagaggtac 328
Query: 423 attgacagtggggagaggttacgtgttatcctgggtaaccttgccactctaggcttcaga 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 attgacagtggggagaggttacgtgttatcctgggtaaccttgccactctaggcttcaga 268
Query: 483 gtctaatcacaggatgtaactttggctctacccctaggtctgtgtttcattttcttatgg 542
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtctaatcacaggatgtagctttggctctacccctaggtctgtgtttcattttcttatgg 208
Query: 543 gtaaaacagacacataacacacacacacacacacacacacacacacacacacacacacac 602
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 207 gtaaaacagacacata--acacacacacacacacacacacacacacacacacacacactc 150
Query: 603 caaggttagcattggtaaagaacaaactggaaatcatatactcaa 647
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 caaggttagcattggtaaagaacaaactggaaatcatatactcaa 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 16
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_h18.g1 MSMg01no499_h18.g1 CHROMAT_FILE:
MSMg01no499_h18.g1 PHD_FILE: MSMg01no499_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:52 2005
(663 letters)
>mm_chr6_54490815_54491877
Length = 1063
Score = 1251 bits (647), Expect = 0.0
Identities = 659/663 (99%)
Strand = Plus / Plus
Query: 1 ctggaaagaagctatatctacagagattgactgactatgagaaccacagctctgtggaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggaaagaagctatatctacagagattgactgactatgagaaccacagctctgtggaga 260
Query: 61 agttggaatgttgcagatccagaggctaattaattacctttctcggttctcatcttccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttggaatgttgcagatccagaggctaattaattacctttctcggttctcatcttccag 320
Query: 121 aagagccatcccttgcccacctctgtgacagaacatcttgtgaataacagatagaaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagagccatcccttgcccacctctgtgacagaacatcttgtgaataacagatagaaacct 380
Query: 181 tttagaatctatgagctcggcagacctctagcttccaccaatccaaacgttaagaatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttagaatctatgagctcggcagacctctagcttccaccaatccaaacgttaagaatgtc 440
Query: 241 atcagatcgtatcctgagactatagaaaagcctcttccatcttgcaggaatcacctctct 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcagatcacatcctgagactatagaaaagcctcttccatcttgcaggaatcacctctct 500
Query: 301 gatggacctactatgcattttaaacttgccttgattcacgactttcttttttccataaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatggacctactatgcattttaaacttgccttgattcacgactttcttttttccataaaa 560
Query: 361 ctatacaacttcatggaactgcttccatgttggaccatggaatttggagtaacctaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatacaacttcatggaactgcttccatgttggaccatggaatttggagtaacctaaata 620
Query: 421 tgtgtccccaggctatggtcatccaaatttttggttccagaataaaccatctcttattcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgtccccaggctatggtcatccaaatttttggttccagaataaaccatctcttattcc 680
Query: 481 ctttatgaggagacctgtagctttgcatccaacagaaatcatagcctccatctaaacaat 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttatgaggagacctgtagttttgcatccaacagaaatcatagcctccatctaaacaat 740
Query: 541 gttcctaacaatgcacgagtcaacatccattttttgttatttctgctcttataaatattt 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttcctaacaatgcacaagtcaacatccattttttgttatttctgctcttataaatattt 800
Query: 601 tccctggggaggaagagaaacaatttgccaaaagctgatcccaaatcatggaggttaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tccctggggaggaagagaaacaatttgccaaaagctgatcccaaatcatggaggttaaag 860
Query: 661 agc 663
|||
Sbjct: 861 agc 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
