CGATCACTATTTTCAGAAATGCGCGGAATTCCAAGTCATGTCTTATTCTG
CCTAAAACTGTTTCCTTTTTAAATTGACATATTATAAGCTGTCCTATCAT
TTTATTTATTCTTTATGGCAATGAAAGTGATAGTATGAGGATATATTTAC
TAGGAATAATCAAATTTATTAGTTCCCTGAACAGGGAATGATTTTATTTT
CATGGGATGATATATTTAGATATATATAATGATGGACAAATTGAAGGAGA
TTATAAATTCTTACAATAGGAAGGTCTGAAGGTATTGTGNTTCATTAAGA
GATGCTTCTCTATTAGATGAGAGATGTTTGTAGATTGGGAGCATGGTACA
TTGTTAGGATTTGAATTATGAACTTGATTTAGGAGAGGGAGACAAGAGTT
TTAAGATGATATAAGTTAAGTGGGCACTTAGAACCATTTATTTTATCATT
GCTGAAAACAAACAGTCAATGAAAAAAAATAAGAGATGGAATTATTTATT
TTAACTCACAGCTTTATAAAGCTCAATTTATAATGCTTGCATCTGCTAAG
TCCACACCATGTAGAGTAGGGCACCATGGTAGCAGAAATATGAAAAAGAG
GAAAATAGAGATTAAGAAAGGGACAGGGGTCAGATGCTGTCATGCTCTCT
CTAATCCACTTCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXAAAATCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAA
TGTTCAACATCCTAAAATTCAGGTGACAGTAGATGCTGGCGAGGATGTGG
AGAAAGAGGAACACTCCTCCATTTTTGGTGGGATTGCAGGCTTGTACAAC
CACTCTGGAAATCAGTCTGGCGGTTCCTCATAAAATTGGACATAGTACTA
CCAGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCC
TACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTA
TAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAAGAATGG
ATACAGAAAATGTTGTACATCTACACAATGGAGTACTACTCAGCTATTAA
AAAGAATGAATTTATGAAATTCCTAGCCAAATGGATTGACCTGGAGGGCA
TCATCCTGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTAC
TCACTGATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAG
ATACAATTTCCTAAACACATGAAACTCGAGAAGAATGAGTACTGAAGTGT
GGACACTATGCCCCTCCTTAGAATTGGGA

Query= MSMg01no500_g11.b1 MSMg01no500_g11.b1 CHROMAT_FILE:
MSMg01no500_g11.b1 PHD_FILE: MSMg01no500_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:02 2005
         (559 letters)



>mm_chr6_26616206_26617165
          Length = 960

 Score = 1054 bits (545), Expect = 0.0
 Identities = 556/560 (99%), Gaps = 1/560 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctaaaactgtttcctttttaaattgacatattataagctgtcctatcattttatttatt 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 760 cctaaaactgtttcctttttaaattgacatattataagctctcctatcattttatttatt 701

                                                                       
Query: 61  ctttatggcaatgaaagtgatagtatgaggatatatttactaggaataatcaaatttatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ctttatggcaatgaaagtgatagtatgaggatatatttactaggaataatcaaatttatt 641

                                                                       
Query: 121 agttccctgaacagggaatgattttattttcatgggatgatatatttagatatatataat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agttccctgaacagggaatgattttattttcatgggatgatatatttagatatatataat 581

                                                                       
Query: 181 gatggacaaattgaaggagattataaattcttacaataggaaggtctgaaggtattgtgn 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 580 gatggacaaattgaaggagattataaattcttacaataggaaggtctgaaggtattgtgt 521

                                                                       
Query: 241 ttc-attaagagatgcttctctattagatgagagatgtttgtagattgggagcatggtac 299
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttcaagtaagagatgcttctctattagatgagagatgtttgtagattgggagcatggtac 461

                                                                       
Query: 300 attgttaggatttgaattatgaacttgatttaggagagggagacaagagttttaagatga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 attgttaggatttgaattatgaacttgatttaggagagggagacaagagttttaagatga 401

                                                                       
Query: 360 tataagttaagtgggcacttagaaccatttattttatcattgctgaaaacaaacagtcaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tataagttaagtgggcacttagaaccatttattttatcattgctgaaaacaaacagtcaa 341

                                                                       
Query: 420 tgaaaaaaaataagagatggaattatttattttaactcacagctttataaagctcaattt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgaaaaaaaataagagatggaattatttattttaactcacagctttataaagctcaattt 281

                                                                       
Query: 480 ataatgcttgcatctgctaagtccacaccatgtagagtagggcaccatggtagcagaaat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ataatgcttgcatctgctaagtccacaccatgtagagtagggcaccatggtagcagaaat 221

                               
Query: 540 atgaaaaagaggaaaataga 559
           ||||||||||||||||||||
Sbjct: 220 atgaaaaagaggaaaataga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 960
Length adjustment: 10
Effective length of query: 549
Effective length of database: 950
Effective search space:   521550
Effective search space used:   521550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)