GACTCACTATTTCCAGXXXXXXXXXXXXXXXXXXXXXTTTACAGAAAGAA
CAGTTTCAGGGGGAGGGGCAGAAGGGATGAAAGAGAATAACTGCCAAGAA
TGACTAAAACTCATTGTATTTGCATACATTTGTGAAACCATCAAAGGATT
TTTTTAAAAAATGAAAACAATAAAGGCACCTTCCTTTTTTTCTCTTTCCA
GAATTGTACCATGCCTAACTACAAACTGCTTTATTTTAATATGAGGGGAA
GAGCCGAAATTATTCGCTACATATTCGCTTATTTGGACGTAATTTATGAG
GATCACAGAATAGAACAAGCTGACTGGCCTAAAATCAAGCCAAGTAAGTG
TCACAAACTGTTCAGCCTTATGCAGGGAGAGTGGACTTCAGGGCTTTCCA
GTGAAATGGAAGCCCAGCCCCACAGAGCTTAACACTGAGACGCAGCTGTT
CAGGTAAGCAAAACAGATGAGGACTGGTCTCTGGGCGTGCTCTGGTTTTT
ATCTTCTTCCTCAATAAATGGCTCATAGAACTATAAGAAACAGCTGGGCC
ACTGACATCAGTTGAATATCACCCCTGCCAAGAGTGTGACCTGCTAATTT
ACATAAACTTCCCCAAACATCAGTTCCTTGTTTATACAATGAGTCCAGAG
TTAACAGCCAT

AAGAGAATACGTGGAGTCGTCTCGTCGCCTGATGGAGATGAGGACGCGTA
TATTCTTCTACGATGAGTAATGGTGAGTTTCGGGAGGGCGGGTTTCTACT
CTATAGAGGAGAGTGCCCGCGGTGTGGAAATACGTGGTTATGGTAGTAGA
TGACGAGGAAATAGTAAGATGAGATCTTGGATAAGAAACGAGAAGTGTGC
TGCTAGGACGTGAGACATATATGTTTACGCAGCTTACATAGACACGCGCC
GGATACACACGAGCTGACGTGTGTGATGCAGCGGTTCCGCTGATGAGGTA
CATGTGGCGGCACGACGGATATAACTGACTATTCTGCCTTGAAACCACGT
TAGTAGTACAAATGAGTCGTGAATGCACGAGCGTATAGAACGCGATCTAC
TAGATCCACACGCTTACGTTCTAGATATGTTGATAGGTGCTCGTCATGAC
ATGACGCAGAACGCCNACTAGAATGAATGTAATCCCGCGAAATCAACGAA
CTACGAATGAATAGCTCGTGCTGTGTGTATGTTTAGTTTCGTGCCTAGAT
CGTTACTGTATCATACGTATAGAGCCGTATGAGGCGTAAATCATTGACGG
ATATATTAGTGGTTAGGAGGATGTGATCATCGGCATATAGCTGCAGTAGA
GTGATCTGCGGTTGTCGTGATGCAGATGGCGTATAGAGTATACGGCTAGT
TGAGGTAGAATGACGACGAGTCCGCAGTTTCATATACTACTAGACGAGTA
GTTGAGAGGGTTATGGAAGATCGGAAATCGATAACAGGGCGAGAGAAATA
TTAATCGATATATAGCATACGATAATGTGATCACGTACGGCGTTCGTATC
ACAGCCACACTCCTNTCTGACATTGACTAGTTCGATCCGTCTTCGCAATA
GACACAGAGAAGAGCGCTAGGCTAGAAAGGAAGATAGCTGCCGAGTGAAG
TTNAGGTCGTCGCTCTGTACACACTGAGTACGATTGTATTGAGAGGAGTC
TGAAGGACTATATTTGATAACGGAGGCGAGTGCATATATAGGTTTTACAT
AGTAGGCTATGNCCGATGATTACAGCCGCATATGTAATATTCGCGTTTTA
AATTAATATTACAATGTTTAAANTGAGGATCATACAGTAGACGACAGGAA
GAGAGCAGAATATATTCAGTCACTTACTTGTCGCTAGTCACGTACCAGAT
ACACCACGC

Query= MSMg01no500_n13.b1 MSMg01no500_n13.b1 CHROMAT_FILE:
MSMg01no500_n13.b1 PHD_FILE: MSMg01no500_n13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:34 2005
         (611 letters)



>mm_chr6_65087641_65088651
          Length = 1011

 Score = 1129 bits (584), Expect = 0.0
 Identities = 605/612 (98%), Gaps = 2/612 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtttcagggggaggggcagaagggatgaaagagaataactgccaagaatgactaaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 cagtttcagggggaggggcagaagggatgaaagagaataactgccaagaatgactaaaac 752

                                                                       
Query: 61  tcattgtatttgcatacatttgtgaaaccatcaaaggatttttttaaaaaatgaaaacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 751 tcattgtatttgcatacatttgtgaaaccatcaaaggattttttt-aaaaatgaaaacaa 693

                                                                       
Query: 121 taaagg-caccttcctttttttctctttccagaattgtaccatgcctaactacaaactgc 179
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 taaaggccaccttcctttttttctctttccagaattgtaccatgcctaactacaaactgc 633

                                                                       
Query: 180 tttattttaatatgaggggaagagccgaaattattcgctacatattcgcttatttggacg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 632 tttattttaatatgaggggaagagccgaaattattcgctacatattcgcttatttggaca 573

                                                                       
Query: 240 taatttatgaggatcacagaatagaacaagctgactggcctaaaatcaagccaagtaagt 299
           |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 taaagtatgaggatcacagaatagaacaagctgactggcctaaaatcaagccaagtaagt 513

                                                                       
Query: 300 gtcacaaactgttcagccttatgcagggagagtggacttcagggctttccagtgaaatgg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtcacaaactgttcagccttatgcagggagagtggacttcagggctttccagtgaaatgg 453

                                                                       
Query: 360 aagcccagccccacagagcttaacactgagacgcagctgttcaggtaagcaaaacagatg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aagcccagccccacagagcttaacactgagacgcagctgttcaggtaagcaaaacagatg 393

                                                                       
Query: 420 aggactggtctctgggcgtgctctggtttttatcttcttcctcaataaatggctcataga 479
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 392 aggactggtctctgggcgtgctctggtttttatcttcttcttcaataaatggctcataga 333

                                                                       
Query: 480 actataagaaacagctgggccactgacatcagttgaatatcacccctgccaagagtgtga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 actataagaaacagctgggccactgacatcagttgaatatcacccctgccaagagtgtga 273

                                                                       
Query: 540 cctgctaatttacataaacttccccaaacatcagttccttgtttatacaatgagtccaga 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 272 cctgctaatttacataaacttccccaaacatcagttccttgtttatacaatgagttcaga 213

                       
Query: 600 gttaacagccat 611
           ||||||||||||
Sbjct: 212 gttaacagccat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space:   601601
Effective search space used:   601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)