Query= MSMg01no502_d08.b1 MSMg01no502_d08.b1 CHROMAT_FILE:
MSMg01no502_d08.b1 PHD_FILE: MSMg01no502_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:11 2005
(456 letters)
>mm_chr6_118333061_118333916
Length = 856
Score = 692 bits (358), Expect = 0.0
Identities = 377/390 (96%), Gaps = 12/390 (3%)
Strand = Plus / Minus
Query: 1 ttggtttattttgtgctataaaaatattaaactattttcccattaattttggcctagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttggtttattttgtgctataaaaatattaaactattttcccattaattttggcctagtga 325
Query: 61 tttatttggggatgaatacatgacagtttgcttataaatgactgcttactctaccatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttatttggggatgaatacatgacagtttgcttataaatgactgcttactctaccatctt 265
Query: 121 tatgaggttcccaggaggataaatattaaatgaagcttttggattgtattggtattgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatgaggttcccaggaggataaatattaaatgaagcttttggattgtattggtattgact 205
Query: 181 gagtagagaggccacaggtggcaaaagttacagagttgggtaagtggggccacccaatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gagtagagaggccacaggtggcaaaagttacagagttgggtaagtggggccacccaatcc 145
Query: 241 tgtttttttt------cagatgatagcaccaagagccccagtatgacagagatggagcta 294
|| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tg------ttggaacccagatgatagcaccaagagccccagtatgacagagatggagcta 91
Query: 295 caaggttgttagccttgcagagctttggtctttctttgacctaatctttctatgcagtct 354
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 90 caaggttgttagccttgcagagctttggtctttctgtgacctaatctttctatgcagtct 31
Query: 355 tccattttggagctggaaaatctactctgt 384
||||||||||||||||||||||||||||||
Sbjct: 30 tccattttggagctggaaaatctactctgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_d08.g1 MSMg01no502_d08.g1 CHROMAT_FILE:
MSMg01no502_d08.g1 PHD_FILE: MSMg01no502_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:11 2005
(625 letters)
>mm_chr6_118114620_118115644
Length = 1025
Score = 1139 bits (589), Expect = 0.0
Identities = 616/625 (98%)
Strand = Plus / Plus
Query: 1 cagggtaggggttgcctcccagggtcacaatctcccatagcagcactccaaaggaccacc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 cagggtaggggttgcctcccagggtcacaatctcccagagcagcactccaaaggaccacc 260
Query: 61 tgtggcgaggaaggggagcagtaagcagcttcctggctcctggagcctccttggtggacc 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggcgaggaaagggagcagtaagcagcttcctggctcctggagcctccttggtggacc 320
Query: 121 ccggatgtctacgtctgtaactgacctaatcagctgccagtgcctaaatggatgacacac 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ccggatgtctacgtctgtaactgacctaatcagctgccagtgcctaaacggatgacacac 380
Query: 181 agggatcttagcctggctccactgcacgggcaggtgtgtaatagagctggaacactcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggatcttagcctggctccactgcacgggcaggtgtgtaatagagctggaacactcaag 440
Query: 241 tctcaatctgctgccactgaaggacgaccttaaaggatggaggtcctagcaaccgaactc 300
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tctcaagctgctgccactgaaggacgaccttaaaggatggaggccctagcaaccgaactc 500
Query: 301 agggtgtgctgtgaaattttcattaagtcttagaacaacttttatagaaaatatttagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggtgtgctgtgaaattttcattaagtcttagaacaacttttatagaaaatatttagta 560
Query: 361 gtaagaggacactggggttgcggataaaaacatcacgaaacaggtatcataaagtacgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 gtaagaggacactggggttgcggataaaaacatcacgaaacaggtatcataaagtacata 620
Query: 421 tgtgcacactacaggagagagccaaaggtaacaagggaggggcccactgtgattcaaggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgcacactacaggagagagccaaaggtaacaagggaggggcccactgtgattcaaggc 680
Query: 481 tgtctgtctcctattggatttttctttgtatttcctgattcttctaactcaacacgttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 tgtctgtctcctattggatttttctttgtatttcctgattcttctaacttaacacgttgt 740
Query: 541 tatcagaaaactattgttcggaattgctgaagaaagacctctattttcacagctctactc 600
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 741 tatcagaaaactattgttcggaattgctttagaaagacctctattttcacagctctactc 800
Query: 601 aagatctgtatctccgcaagattgc 625
|||||||||||||||||||||||||
Sbjct: 801 aagatctgtatctccgcaagattgc 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
