Query= MSMg01no502_i09.b1 MSMg01no502_i09.b1 CHROMAT_FILE:
MSMg01no502_i09.b1 PHD_FILE: MSMg01no502_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:35 2005
(517 letters)
>mm_chr6_88344152_88345068
Length = 917
Score = 948 bits (490), Expect = 0.0
Identities = 512/520 (98%), Gaps = 5/520 (0%)
Strand = Plus / Plus
Query: 1 tattttaaacaactgaaacaaaaattgttttaagttacagctgtgtctgggctactccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tattttaaacaactgaaacaaaaattgttttaagttacagctgtgtctgggctactccat 259
Query: 61 caagcacttaagatacagagctgattatttttctggcaacaaggaagaaagaaagactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caagcacttaagatacagagctgattatttttctggcaacaaggaagaaagaaagactga 319
Query: 121 aagcatggtgtcctgttaccagctgttttggagcagtccttacaatctatgtctgcttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagcatggtgtcctgttaccagctgttttggagcagtccttacaatctatgtctgcttca 379
Query: 181 gggccagacccagcagagtagtctgaggacttaagcctctgcggtttggggtttttttgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 380 gggccagacccagcagagtagtctgaggacttaagcctctgcggtttgggttttttttgt 439
Query: 241 tttttt--ttgttttttgt-ttttttgtttttttccctctctctgctgcccattctcatt 297
|||||| || |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttttttggtt-tttttt-tattttttgtttttttccctctctctgctgcccattctcatt 497
Query: 298 ctccaggcactttacttacatgaatcacaaagggtagccccgtgaagagcttcccccaaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctccaggcactttacttacatgaatcacaaagggtagccccgtgaagagcttcccccaaa 557
Query: 358 gctgctaagacatcagaaagtgaccttaggttgcatttggattggcctcagcctgttccc 417
|| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcagctaagacatcagaaagtaaccttaggttgcatttggattggcctcagcctgttccc 617
Query: 418 tggatgtgggctgcagctttagctctttctactgatctgcagagtagacaaagcgaccca 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tggatgtgggctgcagctttagctctttctactgatctgcagagtagacaaagcgaccca 677
Query: 478 aggaagctcttgagccttttatgcagaacaagaatgaaga 517
||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aggaagctcttgagccttttatgcagaacaagaatgaaga 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_i09.g1 MSMg01no502_i09.g1 CHROMAT_FILE:
MSMg01no502_i09.g1 PHD_FILE: MSMg01no502_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:35 2005
(625 letters)
>mm_chr6_88514293_88515317
Length = 1025
Score = 1162 bits (601), Expect = 0.0
Identities = 619/625 (99%)
Strand = Plus / Minus
Query: 1 attttggcaaggttttctggtacaggaccggtggtccctactatagcgcagatactaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 attttggcaaggttttctggtacaggaccggtggtccctactatagcgcagatactaata 674
Query: 61 tgcaacctgcagctactctctccctcagcactacaagggaacgctgcaggcatgttagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tgcaacctgcagctactctctccctcagcactacaagggaacgctgcaggcatgttagga 614
Query: 121 agcaggacctgccacctctccagttcagcccatccctggatgcctagatcccacccagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agcaggacctgccacctctccagttcagcccatccctggatgcctagatcccacccagag 554
Query: 181 cctgagcctgagatgctctgctttcagctcgccagggtatccttaccctcagcttcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cctgagcctgagatgctctgctttcagctcgccagggtatccttaccctcagcttcagct 494
Query: 241 ttttaggatcccagcaacgctcccacctcattctcattccttccacatccttccttcctt 300
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 493 tcccaggatcccagcaacgctcccacctcgttctcattccttccacatccttccttcctt 434
Query: 301 cactggggactagagaggtttcctgattcccttatctgcccagaagaactctttttatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cactggggactagagaggtttcctgattcccttatctgcccagaagaactctttttatat 374
Query: 361 ccgtctgtccccctccagcacagcctagcctaggcttagtggtggcactatgacagagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ccgtctgtccccctccagcacagcctagcctaggcttagtggtggcactatgacagagga 314
Query: 421 cagacccaaatcaactggcagaaaatgcactggcaagtacctcatgagttccccgactct 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cagacccaaatcaacgggcagaaaatgcactggcaagtacctcatgagttccccgactct 254
Query: 481 caggtgcagtgtaagactgatgctggtgttgactgagcctacagcagcattgggcactgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caggtgcagtgtaagactgatgctggtgttgactgagcctacagcagcattgggcactgt 194
Query: 541 gcacaagtttgttcgtttattcccacaacagcctacaaggcagatactggtatcactctt 600
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gcacaagtttgttcatttattcccacaacagcctacaaggcagatactggtatcactctt 134
Query: 601 actcatgcagaaactgatcacggga 625
|||||||||||||||||||||||||
Sbjct: 133 actcatgcagaaactgatcacggga 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
