Query= MSMg01no502_m03.b1 MSMg01no502_m03.b1 CHROMAT_FILE:
MSMg01no502_m03.b1 PHD_FILE: MSMg01no502_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:52 2005
(654 letters)
>mm_chr6_22058848_22059901
Length = 1054
Score = 1166 bits (603), Expect = 0.0
Identities = 642/655 (98%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 1 gaactggaaagtagcagaaggcaggaatccaagggggctgcgaaaagcataaaaaattaa 60
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 668 gaactggaaagtagcagaaggcaggaatccaaaggggccgcgaaaagcataaaaaattaa 609
Query: 61 ctatttgctctgaatggcaaaaccttgattgcattatattcaaccttctcagagaactgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 ctatttgctctgaatggcaaaaccttgattgcattatattcaaccttctcagagaactgc 549
Query: 121 cggaagtccttcatcattccttccagactttctcggcagcaaataaaggagcagagatat 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 548 cgggagtccttcatcattccttccagactttctcggcagcaaataaaggagcagagagat 489
Query: 181 ttcaccataaagagcaaaagctaaagttataaaggttttatcattgaactgtgtgtatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttcaccataaagagcaaaagctaaagttataaaggttttatcattgaactgtgtgtatag 429
Query: 241 acctatttttttctttttacacaaacaccatggttcaagcaggtcacagctctctccact 300
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 428 acctattcagttctttttacataaacaccatggttcaagcaggtcacagctctctccact 369
Query: 301 gactttaaaacacaacctttctttaagcaacagtaagacctaacagctcatttgcaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gactttaaaacacaacctttctttaagcaacagtaagacctaacagctcatttgcaaaac 309
Query: 361 ttttcatattttattatcatatcaaggtaatatcgatacttaatatatgtagcatgtatt 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ttttcatcttttattatcatatcaaggtaatatcgatacttaatatatgtagcatgtatt 249
Query: 421 aattgtgacaagcagtatacaatgttgcaaaaaggatacattagaaaggaggagattttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aattgtgacaagcagtatacaatgttgcaaaaaggatacattagaaaggaggagattttt 189
Query: 481 cggtggtaaagaggctgctgtgtaagcatttgggcccaagtc-aaaatcattaggaccca 539
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 188 cagtggtaaagaggctgctgtgtaagcatttgggcccaagtcaaaaatcattaggaccca 129
Query: 540 cttaaaagtttgaattgggatgcttatctgtgaccccagcactagagggacagagacagg 599
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 128 cttaaaagtttgaattgggatgcatatctgtgaccccagcactagggggacagagacagg 69
Query: 600 caggtccctgaagcccactggccaacccagtgtaaataaatcagtgagcaccaag 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 caggtccctgaagcccactggccaacccagtgtaaataaatcagtgagcaccaag 14
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_m03.g1 MSMg01no502_m03.g1 CHROMAT_FILE:
MSMg01no502_m03.g1 PHD_FILE: MSMg01no502_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:52 2005
(244 letters)
>mm_chr6_21920464_21921107
Length = 644
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 gatactctcagatccagctatacttgataggcataggacacatgccaactgatgttagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatactctcagatccagctatacttgataggcataggacacatgccaactgatgttagga 260
Query: 61 ctttgccaaatacttttctatatttgtacttaggttttgataagaactctttaatttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgccaaatacttttctatatttgtacttaggttttgataagaactctttaatttact 320
Query: 121 gtaaaaacattaacagtgtgagatggtgtaactattattcttgaacactaccaaaaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaaaaacattaacagtgtgagatggtgtaactattattcttgaacactaccaaaaattt 380
Query: 181 taagtcaatggtagatagtaaccttaatttagaaattatctttaaaagttgaaacatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagtcaatggtagatagtaaccttaatttagaaattatctttaaaagttgaaacatttt 440
Query: 241 aa 242
||
Sbjct: 441 aa 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
