Query= MSMg01no502_o10.b1 MSMg01no502_o10.b1 CHROMAT_FILE:
MSMg01no502_o10.b1 PHD_FILE: MSMg01no502_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:02 2005
(421 letters)
>mm_chr6_129007127_129007948
Length = 822
Score = 799 bits (413), Expect = 0.0
Identities = 416/417 (99%), Gaps = 1/417 (0%)
Strand = Plus / Minus
Query: 1 cgatgtgtagacaaaactgttttagagtggatgtccaagagtattacccacattgcaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cgatgtgtagacaaaactgttttagagtggatgtccaagagtattacccacattgcaact 683
Query: 61 tgcaatcatctataactccagtcctaggggatcaaattctgcatcttgcttcctagggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgcaatcatctataactccagtcctaggggatcaaattctgcatcttgcttcctagggca 623
Query: 121 ctgtacctacatagtacacagacacacatgcaaggagaacatcatacaccctaaataata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ctgtacctacatagtacacagacacacatgcaaggagaacatcatacaccctaaataata 563
Query: 181 attttattttagaattattttaattgagattttacttggatcatagcatatgcttcaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 attttattttagaattattttaattgagattttacttggatcatagcatatgcttcaatt 503
Query: 241 ttatt-tatttcacattgagtgatgagggtctgtaggtatctattctaaaaagtttcatt 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttattatatttcacattgagtgatgagggtctgtaggtatctattctaaaaagtttcatt 443
Query: 300 atttctttatatagtaaattcaatatttttcttttgattacaatggaaaatttgacaaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atttctttatatagtaaattcaatatttttcttttgattacaatggaaaatttgacaaag 383
Query: 360 ttttttggtttttttttttggtttgtggtttgtttgtttattttgttttgttttttt 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttttttggtttttttttttggtttgtggtttgtttgtttattttgttttgttttttt 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 822
Length adjustment: 9
Effective length of query: 412
Effective length of database: 813
Effective search space: 334956
Effective search space used: 334956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_o10.g1 MSMg01no502_o10.g1 CHROMAT_FILE:
MSMg01no502_o10.g1 PHD_FILE: MSMg01no502_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:02 2005
(419 letters)
>mm_chr6_128874840_128875659
Length = 820
Score = 493 bits (255), Expect = e-144
Identities = 327/353 (92%), Gaps = 8/353 (2%)
Strand = Plus / Plus
Query: 72 gggatgataaatattgttatccatattttgagtttataactacttcttgttggatttcag 131
|||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct: 272 gggatgataaatattgttatccatatcatgagtttataactacttcttgttgtattttag 331
Query: 132 gtatgccaccgg---gatactgaagaagatgactacctcagtaataaaggaatcagaagt 188
||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 332 gtatggcaccggacag--actgaagaaggtgactacctcagtaataaaggaatcagaagt 389
Query: 189 gccaggatcaccacagagaagaaacag-atttgtagcaagctgtaatggcagcccttgtt 247
|||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||
Sbjct: 390 gccaggatcaccacagagaagaaa-tgtatttgtaggaagctgtaatggcagcccttgtt 448
Query: 248 aaattacttagctttattgattatcaacttaattttttatttaaaaatacttatttattt 307
||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 449 aaattacttagcttttttgattatgaaattaattttttatttaaaaatacttatttattt 508
Query: 308 gtt-cgtgttcattttttgagatagagtctctgtatatatccctgcctgttctggaattt 366
|| | |||| || |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 509 ttttcatgtttatattttgagatagagtctctgtatatattcctgcctgttctggaattt 568
Query: 367 actatgtacaccaggtttcccttgaactcacagaaatctgcctgcctctgcct 419
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 569 actatgtagaccaggtttcccttgaaatcacagaaatctgcctgcctctgcct 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
