Query= MSMg01no503_k15.b1 MSMg01no503_k15.b1 CHROMAT_FILE:
MSMg01no503_k15.b1 PHD_FILE: MSMg01no503_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:00 2005
(238 letters)
>mm_chr6_94610293_94610930
Length = 638
Score = 387 bits (200), Expect = e-112
Identities = 224/238 (94%), Gaps = 10/238 (4%)
Strand = Plus / Minus
Query: 1 atgaacttctcagtggtggagacccaggactttcccttagagaattctggtaaatcctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgaacttctcagtggtggagacccaggactttcccttagagaattctggtaaatcctgg 261
Query: 61 tgactcaaagaggtaccagcagtgagtggtggaaactaggtaagaatatggaaggggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgactcaaagaggtaccagcagtgagtggtggaaactaggtaagaatatggaaggggaaa 201
Query: 121 aaaacaaaacaaaacaaaacaaaacaactcaacacaacacaacacagcccacagttgacg 180
||| |||| |||| |||||||||||||| |||||||||||||||||||||
Sbjct: 200 aaaccaaaccaaaccaaaacaaaacaac----------acaacacagcccacagttgaca 151
Query: 181 caccagtgcttccaaattaactgggctcaagtcggttctcccggaccttgcggtcttc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 caccagtgcttccaaattaactgggctcaagtcggttctcccggaccttgcggtcttc 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no503_k15.g1 MSMg01no503_k15.g1 CHROMAT_FILE:
MSMg01no503_k15.g1 PHD_FILE: MSMg01no503_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:00 2005
(587 letters)
>mm_chr6_94454704_94455691
Length = 988
Score = 1083 bits (560), Expect = 0.0
Identities = 581/588 (98%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 1 caggtcccctgacttaccctcttcagtgctgagat-acaaatatatgctggaatatctct 59
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 caggtcccctgacttaccctcttcagtgctgagattacaaatatatgctggaatatctct 260
Query: 60 ttcactttttatttactttcactttttattaggattaaaagacctaagataaaattatat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcactttttatttactttcactttttattaggattaaaagacctaagataaaattatat 320
Query: 120 tacttcccacctttgtcctctcttgccttcccatgtcccttcctgcccatacccctcccc 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 tacttcccacctttgtcctctcttcccttcccatgtcccttcctgcccatacccctcccc 380
Query: 180 catcaaaatgatggcctcttttgactattattgttccatacacatgcttaaatatataaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcaaaatgatggcctcttttgactattattgttccatacacatgcttaaatatataaa 440
Query: 240 ctctacctgccgaatccctttgtggctgtgtgtgtatgatttcagggctgaccgctttgt 299
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacaacctgccgaatccctttgtggctgtgtgtgtatgatttcagggctgaccgctttgt 500
Query: 300 attcaatagccagttgtgggactcatccctgggagagctaagtctcctccctcagtagtc 359
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 attcaatagccagttgtgggactcatccctgggagagctaagtatcctccctcagtagtc 560
Query: 360 attagttgccaagagttttttccctgtgggtggggcccctttagagatttccctctgtgt 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 attagttgccaagagttttttccctgtgggtggggcccctttagaaatttccctctgtgt 620
Query: 420 tatcatgtctgttgatgttattgttcaggtcttatttaggcagccctattgttgaggtat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatcatgtctgttgatgttattgttcaggtcttatttaggcagccctattgttgaggtat 680
Query: 480 catggatgtagcttccctgtcatttctaggagacacaatctcacctcagacttcctagtc 539
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 catggatgtagcttccctgtcatttctaggagacacaatctcaccgcagacttcctagtc 740
Query: 540 ctctggctcttacattctctctgcctcctcctccacaatgttccctga 587
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctctggctcttacattctctctgcctcctcctccacaatgttccctga 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 988
Length adjustment: 10
Effective length of query: 577
Effective length of database: 978
Effective search space: 564306
Effective search space used: 564306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
