Query= MSMg01no504_g21.b1 MSMg01no504_g21.b1 CHROMAT_FILE:
MSMg01no504_g21.b1 PHD_FILE: MSMg01no504_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:02 2005
(548 letters)
>mm_chr6_51688081_51689028
Length = 948
Score = 1013 bits (524), Expect = 0.0
Identities = 539/544 (99%)
Strand = Plus / Minus
Query: 5 gaattcctcttattggctttatgagagcccctgctcacataccaaccactgtccagctta 64
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 719 gaattcctcttagaggctttatgagagcccctgctcacataccaaccactgcccagctta 660
Query: 65 ctgaacccacagactggagaccacatcaagaacccagcagacctacgtgaataaaacttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ctgaacccacagactggagaccacatcaagaacccagcagacctacgtgaataaaacttg 600
Query: 125 gaagcataaaggcaaatatggcatccacatgatagagctgtgtcacactgccaaagccat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gaagcataaaggcaaatatggcatccacatgatagagctgtgtcacactgccaaagccat 540
Query: 185 ctgaggatctcaagagaggcatgctgggaaccaaatgagttcccgataggtgtctgcgtt 244
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctaaggatctcaagagaggcatgctgggaaccaaatgagttcccgataggtgtctgcgtt 480
Query: 245 tgccaggaattgagttgtcatcatggtagtgtggaaacagtaagtaaattcaacattcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tgccaggaattgagttgtcatcatggtagtgtggaaacagtaagtaaattcaacattcat 420
Query: 305 tcatcatttaataaattaatgtttattaaatacctattatccatatgctagcagagataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tcatcatttaataaattaatgtttattaaatacctattatccatatgctagcagagataa 360
Query: 365 atgtttcatatacatcacaccaatatatacaattgtcatggttgtatgggaaaactggca 424
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 359 atgtttcatatacatcacaccaatatatacaatcgtcatggttgtatgggaaaactggca 300
Query: 425 ctttggctagtcacgagaccatgtggagttataagacacatgaaatagcatgacgccagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ctttggctagtcacgagaccatgtggagttataagacacatgaaatagcatgacgccagt 240
Query: 485 tatgatgagacatggcagccaactccaggctcttcttaaaattattatttttttatatta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tatgatgagacatggcagccaactccaggctcttcttaaaattattatttttttatatta 180
Query: 545 ttct 548
||||
Sbjct: 179 ttct 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_g21.g1 MSMg01no504_g21.g1 CHROMAT_FILE:
MSMg01no504_g21.g1 PHD_FILE: MSMg01no504_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:02 2005
(477 letters)
>mm_chr6_51528695_51529571
Length = 877
Score = 835 bits (432), Expect = 0.0
Identities = 455/468 (97%), Gaps = 10/468 (2%)
Strand = Plus / Plus
Query: 19 gccctaaacaggtggcaggcaatgctcctgcctcagcttcttcaagtccttgggttatag 78
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gccc-aaacaggtggcaggcaatgctcctgcctcagcttcttcaagtccttgggttatag 278
Query: 79 atgcgagccaccacactcagccgagatggcttgtgttttgaatctagcagacccagctgt 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atgcgagccaccacactcagccgagatggcttgtgttttgaatctagcagacccagctgt 338
Query: 139 ttgtcagctttgtggtacccagagggaccgcctgctcattcggggtttacccagaggaga 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttgtcagctttgtggtacccagagggaccgcctgctcattcggggtttacccagaggaga 398
Query: 199 ggcatcgtggcttagcctaggctggggacttaggcttgtttgtttcccaagtttgtctca 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ggcatcgtggcttagcctaggctggggacttaggcttgtttgtttcccaagtttgtctca 458
Query: 259 gggctgctatggggaaacagacgctagctggtgacagtgttgtcagctatacctgtcagg 318
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gggctgctacggggaaacagacgctagctggtgacagtgttgtcagctatacctgtcagg 518
Query: 319 tgctctctggtccttttcatgtccaccctgtttgccccactcagagctgatgtcatttcc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgctctctggtccttttcatgtccaccctgtttgccccactcagagctgatgtcatttcc 578
Query: 379 tggaggagaaccagggctgacatttgcaggtgtctgggatgctttgtgaagacctgcagg 438
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 579 tggaggagaaccagggctgacatttgcagatgtctgggatgctttgtgaagagctgcagg 638
Query: 439 aagtcagtgctgatcc---------tggacgtggggttaaaaatgcag 477
|||||||||||||||| |||||||||||||||||||||||
Sbjct: 639 aagtcagtgctgatccacggacgcctggacgtggggttaaaaatgcag 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
