CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTTAGCTCTGTACCCCATTTTTCAATAGGGTTATTTGGTT
CTTGTCTTAGTTAGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGA
AAGTCTTATAAAAAACAACATTTAATTGGGGCTGGCTTACAGGTTTAGAG
GTTCAGTCCTTTATCATCAAGGAGGGATCATGGCAGTATGCAGGCAGGCA
TGGCTCAGGAGGAGCTGAGAGTTCTATGCCTTCATCCAAAGGCTGATAGT
GGAAGACTGACTTCCAGGCAACTAGGGTGAGGATCTTATGCCCACATCCA
CAGTGACACACCCATTCCAACCAGGTCACACCTATTCCAACAAGGCCACA
CCTCCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACAGT
TCTCTACAGTCTAACTTCTTTTTTTTTTTATTACATATTTTCCTCAATTA
CATTTCCAATGCTATCGCAAAAGTCACCCCCATTCCCCTACCCACACATT
CCCATTTATTGGCCCTGGCATTCCCCTGTACTGGAGCATAGAAAGTTTGC
CTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTG
ATACATATGTAGCTAGAGTCAAGAGCTCCCGGGTACTAGTTAGTTCATAA
TGTTGCACCTACAGGGTTGCAGATCTCTTTAGCTCCTTGGAACTTTCTCT
AGCTCCTCCATTGGG

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAACTGTATACAATCATAGATAC
AACCTGCCTGTGGCAAAGCCATGTTTTTCTAAGAGACATAATTGAAAATA
ACAGCAAGCAATAATGATTAATCTGACGTAAACTCACTTCTAACAAGTAC
ATCTGTGAGGTACACAAACCCACATTCCAAGAACAATTCTGTGCCTTGAA
GAAACTGAGGTCACAAGACTGTTTCCTTGGAGTGTTCTCACAAGCACTCA
GAATTCTCCTCACAGGACTCCATTCTTCAACCATGTTCTGACACCTGTCT
TACTCAGAAGACACAATCTTATAGCAGACTTCTTAGTCCTCTGGCACTTA
AAATCTTCTTGCCCCCTCTTCCATCATATTCCTTGAGACTTGGGAGTAGA
TATGGAGTTGTAGAAGTTTATCTGAGGCTGGACATCCATGATCATTTATT
CTAGGTATTTGACCAGGTGTGCCTTTCTGTAATCGTCTCTGCCGACTGCA
AAAGGACCTATCACTTTATTGACTGCCTTTTAAATTTTTTCTTCCTGTTT
CTTTTAATTCCAGGATGCCCTTTCCTTACATCATAGCTTGGCTTAGTTCT
TGCTCACCTAAACGTGGTGCCTTTCCCTTTTAAGAACTCCCCAGTCCCAG
GTACAGCCCTTTCTGTGGTTAGACCTTTGTGTTTTAGTTTGCTGAATGAA
TTTAGATTGTGCACATGAGCCCTTGTTACTGATTTTTTTCAGN

Query= MSMg01no504_o14.g1 MSMg01no504_o14.g1 CHROMAT_FILE:
MSMg01no504_o14.g1 PHD_FILE: MSMg01no504_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:41 2005
         (608 letters)



>mm_chr6_7376335_7377342
          Length = 1008

 Score = 1060 bits (548), Expect = 0.0
 Identities = 593/608 (97%), Gaps = 2/608 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactgtatacaatcatagatacaacctgcctgtggcaaagccatgtttttctaagagaca 60
           ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 201 aactgtatacaatcatagatacaacttgcctgtgacaaagccatgtttttctaagagaca 260

                                                                       
Query: 61  taattgaaaataacagcaagcaataatgattaatctgacgtaaactcacttctaacaag- 119
           |||||||||| |||||||||||||||||| |||||||| |||||||| || |||| | | 
Sbjct: 261 taattgaaaacaacagcaagcaataatgactaatctgaagtaaactcgctcctaaga-gc 319

                                                                       
Query: 120 tacatctgtgaggtacacaaacccacattccaagaacaattctgtgccttgaagaaactg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tacatctgtgaggtacacaaacccacattccaagaacaattctgtgccttgaagaaactg 379

                                                                       
Query: 180 aggtcacaagactgtttccttggagtgttctcacaagcactcagaattctcctcacagga 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggtcacaagactgtttccttggagtgttctcacaagcactcagaattctcctcacagga 439

                                                                       
Query: 240 ctccattcttcaaccatgttctgacacctgtcttactcagaagacacaatcttatagcag 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctccattcttcaaccatgttctgacacctgtcttactcagaagacacaatcttatagcag 499

                                                                       
Query: 300 acttcttagtcctctggcacttaaaatcttcttgccccctcttccatcatattccttgag 359
           |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 500 acttcttagtcctctggctcttcaaatcttcttgccccctcttccatcatattccttgag 559

                                                                       
Query: 360 acttgggagtagatatggagttgtagaagtttatctgaggctggacatccatgatcattt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acttgggagtagatatggagttgtagaagtttatctgaggctggacatccatgatcattt 619

                                                                       
Query: 420 attctaggtatttgaccaggtgtgcctttctgtaatcgtctctgccgactgcaaaaggac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attctaggtatttgaccaggtgtgcctttctgtaatcgtctctgccgactgcaaaaggac 679

                                                                       
Query: 480 ctatcactttattgactgccttttaaattttttcttcctgtttcttttaattccaggatg 539
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 680 ctatcactttattgactgccttttaaattttttcttcctgttacttttaattccaggatg 739

                                                                       
Query: 540 ccctttccttacatcatagcttggcttagttcttgctcacctaaacgtggtgcctttccc 599
           |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 740 ccctttccttacatgatagcttggcttagttcttgttcacctaaacgtggtgcctttccc 799

                   
Query: 600 ttttaaga 607
           ||||||||
Sbjct: 800 ttttaaga 807


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)