NAAAGAACTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
CCGCGGAATTCTGTAGATTCTAACCCATTTCCTGGTTCAGCAGTAGTCAG
CGTAAAGGAAATGGAAACAATTGCAAATCTCAAGAAAGGTTTTTTTCTAT
TATCTTATTGCAAAAGGAAATTTTCCTTATCTTGAACATATATTTGTTTA
GCCTCCTTCGGTGGTCTTTAGTTATTTAGATCAAATTCTGCTCACAAAAT
TTAGCATAGTAGTAGCAAGTTTTATAGGGAAATGTACTTACAAGTGAAAT
TAATTAAAAAGTTGTATCCTCTGTTTGCTTTATGTTCCATTAAAAATGTG
TCCTAAGGCTGGGATGTGTAAAATATTTGCCTAACATACATGAGGTTCTA
GATGTATATCACAGTCCTACAATAAAATATCATAATACTGTAATAAAATG
CATAAATATAAAATTTGTCCTAAAAAACTTTTAGCTCATACTTGTAGAAT
TAGGTTGCATATAGATTCAGATACTACCCCCTTTTCCATAGCAAATTTTA
TTAAAAGACTTTTTTCTTGAAGTCAACTGCCATGGTACATGCCTGTAGTC
TCAATATTTGGGAGGCTGAGAGGCAGGATGCTTTCAAGTTGGAGGCCAGT
CTGGGCTACTTGGTAAGATTCTGCCTCTAAATACACTCACTAGCGCATTC
ACACATCTACACACACGCTCTCTCTCTCTCTCAACACACACACACACAAG
CACACAC

NNNGGCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGA
ATGGCAGAGAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGA
AATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGG
CTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAA
AGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACT
CTGGAGATCAGTCTGGCGGTTCCTCAGAAAACTGGATATAGTACTACCGG
AGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACT
GGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAAT
AGCCAGAAGCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATAC
AGAAGATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAG
AATGAATTTATGAAATTCCTGGCCAAATGGATGGACCTGGAGGGCATCAT
CCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCAC
TGATAAGTGGATATTAGCCCAAAACCTAAGATACCCAAGATATAAGATAC
AATTTCCTAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGAAC
ACTATGCCCCTCCN

Query= MSMg01no505_b23.b1 MSMg01no505_b23.b1 CHROMAT_FILE:
MSMg01no505_b23.b1 PHD_FILE: MSMg01no505_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:57 2005
         (657 letters)



>mm_chr6_143024254_143025307
          Length = 1054

 Score = 1247 bits (645), Expect = 0.0
 Identities = 653/657 (99%), Gaps = 3/657 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cccatttcctggttcagcagtagtcagcgtaaaggaaatggaaacaattgcaaatctcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 cccatttcctggttcagcagtagtcagcgtaaaggaaatggaaacaattgcaaatctcaa 647

                                                                       
Query: 61  gaaaggtttttttctattatcttattgcaaaaggaaattttccttatcttgaacatatat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gaaaggtttttttctattatcttattgcaaaaggaaattttccttatcttgaacatatat 587

                                                                       
Query: 121 ttgtttagcctccttcggtggtctttagttatttagatcaaattctgctcacaaaattta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttgtttagcctccttcggtggtctttagttatttagatcaaattctgctcacaaaattta 527

                                                                       
Query: 181 gcatagtagtagcaagttttatagggaaatgtacttacaagtgaaattaattaaaaagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||
Sbjct: 526 gcatagtagtagcaagttttatagggaaatgtacttacaagtgaaattaatt---aagtt 470

                                                                       
Query: 241 gtatcctctgtttgctttatgttccattaaaaatgtgtcctaaggctgggatgtgtaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gtatcctctgtttgctttatgttccattaaaaatgtgtcctaaggctgggatgtgtaaaa 410

                                                                       
Query: 301 tatttgcctaacatacatgaggttctagatgtatatcacagtcctacaataaaatatcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tatttgcctaacatacatgaggttctagatgtatatcacagtcctacaataaaatatcat 350

                                                                       
Query: 361 aatactgtaataaaatgcataaatataaaatttgtcctaaaaaacttttagctcatactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aatactgtaataaaatgcataaatataaaatttgtcctaaaaaacttttagctcatactt 290

                                                                       
Query: 421 gtagaattaggttgcatatagattcagatactacccccttttccatagcaaattttatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtagaattaggttgcatatagattcagatactacccccttttccatagcaaattttatta 230

                                                                       
Query: 481 aaagacttttttcttgaagtcaactgccatggtacatgcctgtagtctcaatatttggga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aaagacttttttcttgaagtcaactgccatggtacatgcctgtagtctcaatatttggga 170

                                                                       
Query: 541 ggctgagaggcaggatgctttcaagttggaggccagtctgggctacttggtaagattctg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ggctgagaggcaggatgctttcaagttggaggccagtctgggctacttggtaagattctg 110

                                                                    
Query: 601 cctctaaatacactcactagcgcattcacacatctacacacacgctctctctctctc 657
           ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 109 cctctaaatacactcacgagcgcattcacacatctacacacacgctctctctctctc 53


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1054
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1044
Effective search space:   675468
Effective search space used:   675468
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)