Query= MSMg01no506_e12.b1 MSMg01no506_e12.b1 CHROMAT_FILE:
MSMg01no506_e12.b1 PHD_FILE: MSMg01no506_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:25 2005
(652 letters)
>mm_chr6_47204743_47205794
Length = 1052
Score = 1220 bits (631), Expect = 0.0
Identities = 646/651 (99%)
Strand = Plus / Minus
Query: 1 atatgaatctattcctgtgtcaagtgcaatcttttgtatctcacaaaatccccagaggct 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 851 atatgaatctattcctgtgtcaagtgcaaccttttgtatctcacaaaatccccagaggct 792
Query: 61 cctctttcaattctctaagcagagaaatgctcagtggagccaactagaggatgtgttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cctctttcaattctctaagcagagaaatgctcagtggagccaactagaggatgtgttatt 732
Query: 121 gcctaaagtaagtgaaaatggtctcaaccaactgctggaggtctgctctggagatctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gcctaaagtaagtgaaaatggtctcaaccaactgctggaggtctgctctggagatctggg 672
Query: 181 agttcagagctccccagggacctggccccatggtcttcccaagtccctttctttcttaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 agttcagagctccccagggacctggccccatggtcttcccaagtccctttctttcttaac 612
Query: 241 actttctcttcttgcatctttgtaaagtgaaaacccatcagcaaataagttatggcccaa 300
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 actttcacagcttgcatctttgtaaagtgaaaacccatcagcaaataagttatggcccaa 552
Query: 301 caaaaccactctgttctgctcttgggatcaggacagttcctgctcagaagatcaggtaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caaaaccactctgttctgctcttgggatcaggacagttcctgctcagaagatcaggtaac 492
Query: 361 taattagatgccgagcaagaggcaatggagaaaagtaaagaaaggaccttgtgtcaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 taattagatgccgagcaagaggcaatggagaaaagtaaagaaaggaccttgtgtcaaggg 432
Query: 421 gtgttggcaaggatcccagagcactgactggccaggtaggagaaagcacaggatgaaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtgttggcaaggatcccagagcactgactggccaggtaggagaaagcacaggatgaaggg 372
Query: 481 ttctctctgtggatatgaatgggagaggagagagtgcaactgcatattgttgacctcggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttctctctgtggatatgaatgggagaggagagagtgcaactgcatattgttgacctcggg 312
Query: 541 caaggaacatactctccttcacctcaagggccgtgactagttcctctccttgcaggactg 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caaggaacatactttccttcacctcaagggccgtgactagttcctctccttgcaggactg 252
Query: 601 tgggcacgaccagatgaggttactgtccctcagttctaacatccacttgag 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgggcacgaccagatgaggttactgtccctcagttctaacatccacttgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_e12.g1 MSMg01no506_e12.g1 CHROMAT_FILE:
MSMg01no506_e12.g1 PHD_FILE: MSMg01no506_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:26 2005
(333 letters)
>mm_chr6_47022549_47023281
Length = 733
Score = 495 bits (256), Expect = e-144
Identities = 284/298 (95%), Gaps = 9/298 (3%)
Strand = Plus / Plus
Query: 3 aaaaaataaagaacaaagtaaatttctaaaaaaaaa--ttgtaggtgggatgggtgtgaa 60
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 194 aaaaaataaagaacaaagtaaatttctaaaaaaaaaaattgtaggtgggatgggtgtgaa 253
Query: 61 ccaactcttttgaactcagcctgtgaatggagggagagagtggcctggggtttctgtaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccaactcttttgaactcagcctgtgaatggagggagagagtggcctggggtttctgtaac 313
Query: 121 tcggctctaagctcagcaagtcctttacttctgcttcactt-------cctagtatttgc 173
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 314 tcggctctaagttcagcaagtcctttacttctgcttcactttctctttcctagtatttgc 373
Query: 174 taatgaaacatggcttgctcttttcctatagacgttacatagaaggttgttaaaatcttt 233
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 374 taatgaaacatggcttgctcttttcctatagatgttacatagaaggttgttaaaatcttt 433
Query: 234 tcatcatctggtgttacatttggatttcatttttaaaaggatgtgtgtgtgtgtgtgt 291
|||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 434 tcatcacctggtgttacatttggatttcatttttataaggatgtgtgtatgtgtgtgt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
