TCCCCTCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXGGGCGGAATTCTTGACATTACTTTAAAATCAGATGAGTCATTATTTTT
TATGTTTTCCCCAGTTTCATGCAGGATGGAAAAAAAATAGAGAAGTTAGA
GTTAGTGGGTTTTGTCTAGAGTCTGCCTAGGTAAAAGAGGGAGTTTAGGT
GCTCTCAGAGGTGTGAATACAACAAAAGATTGTGGACTTTCAGCAGGCGT
GGGAACATGAGAACTAAAGAAGACCACACAGGATGCAGCACAGTGAGGGA
GTGGTGTGCAGCTTCTTGAGGGGTCTCGTTGTAGTTTTGGGTTACTAATG
GTGACTTGAAAGGGAGAGAAATTGGGGGTGGCAACCCCCAAGACATTACC
TGGGAGAACTTTGCAGAAGCAGGGAAGAATGTTGGGAAGGTCATCTGTGT
ACTGAGTTACTAAGATCTGAGACAAAAGACATGCTGGACAGTGTCAAAGA
TGGCAGTGGTGGTGAGAATCCAATAGTGACAAAGTTTAAGGATGTGGAAT
TCAAAGCTGAGGTTTAGTGAGGACTGTTAGATGGTCCAATTTGGAATGTT
AATAGTTTGTGTTACTTTCCCCTCTAGGAATAAGCAATATCAGAATGTGA
ATGTCCTAATGCTTTTAGGAAAACTTGTTTGTGTAAAGATGTTTCATGCT
TTAATCACCAGAAGGTGCCAGAGTCAAGCACATGAGTTTTCTTCTCTTCA
TATGTG

TTTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCTTGAAATTTCACA
TCAAGGTCTGAATGATTCAAAGATGAAATAAATACAACATCATTACAGAC
AATGCTAAACCACATTTATATATATAAACATTAAAAGCAAAATGATACCA
GGAATCTTGACAAAGTGCAGTCATGAAAGTAAGTAATGATATATTTAGAC
TGTAAGTGTAACCTAGTTGCTCCCACCACCCTAGATTCTCAAAGTTTATT
CACAACACCTGATACAGAAATCCCTGTCACCTGACCTAAACGACACACAG
CAAAAGAAAATTGAGAGGCTGTAGCTAAAGCAATTTGACAATGTTAATAA
AATTTCCCTACCCCAAATCACTAATGCAACACCAATTCTCATGACAAAAT
GAATTATGAAACAAACTCAAGAGACAAAAGTCAAAATATAATCTGAACAC
CATTCAATGTGGACAAATGACATAAAGACGGAACAAGCACAGGAATTCAA
AGAAGGCAGAAACAAACTTAATGAAATTCCAGAGAATTCCTACAAGTGGG
TAAGAGAATAATTATACATATGCAGGAAGTGAACGTCTTATCCACGTCTT
ATCCAGAGATATAAAAATCTAAGGAATGCTCACTCTGAAATGAAACAAGA
AATGAACTCTGTAAGCCTGGTGGTGATTCAGTGGCCAATATATGAAGATA
CAGCATTCAGACCAA

Query= MSMg01no506_n05.b1 MSMg01no506_n05.b1 CHROMAT_FILE:
MSMg01no506_n05.b1 PHD_FILE: MSMg01no506_n05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:09 2005
         (623 letters)



>mm_chr6_58553023_58554045
          Length = 1023

 Score = 1011 bits (523), Expect = 0.0
 Identities = 602/637 (94%), Gaps = 18/637 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   agatgagtcattattttt-tatgttttccccagtttcatgcaggatggaaaaaaaataga 59
           ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 191 agatgagtcattattcttatatgttttccccagtttcatgcaggatgaaaaaaaaataga 250

                                                                       
Query: 60  gaagttagagttagtgggttttgtctagagtctgcctaggtaaaagagggagtttaggtg 119
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaagttag--ttagtgggttttgtctagagtctgcctaggtaaaagagggagtttaggtg 308

                                                                       
Query: 120 ctctcagaggtgtgaatacaacaaaagattgtggactttcagcaggcgtgggaacatgag 179
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 309 ctctcagaggtgtgaatacaacaaaagattgtggactttcagcaggtgtgggaacatggg 368

                                                                       
Query: 180 aactaaagaagaccacacaggatgcagcacagtgagggagtggtgtgcag---------- 229
           ||||||||||||||||||||||||||||||||||||||||||||| ||||          
Sbjct: 369 aactaaagaagaccacacaggatgcagcacagtgagggagtggtgagcaggttcttgaga 428

                                                                       
Query: 230 -cttcttgaggggtctc--gttgtagttttgggttactaatggtgacttgaaagggagag 286
            ||||||||||||||||  |  | ||  ||||||||||||||||||||||||||||||||
Sbjct: 429 gcttcttgaggggtctccag--gaagaattgggttactaatggtgacttgaaagggagag 486

                                                                       
Query: 287 aaattgggggtggcaacccccaagacattacctgggagaactttgcagaagcagggaaga 346
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aaattggaggtggcaacccccaagacattacctgggagaactttgcagaagcagggaaga 546

                                                                       
Query: 347 atgttgggaaggtcatctgtgtactgagttactaagatctgagacaaaagacatgctgga 406
            ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 547 gtgttgggaaggtcatctgtgtactgagttactaagatctgagacaaaaggcatgctgga 606

                                                                       
Query: 407 cagtgtcaaagatggcagtggtggtgagaatccaatagtgacaaagtttaaggatgtgga 466
           ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||
Sbjct: 607 cagtgtcaaagatggcagtggtggtgagactccgatagggacaaagtttaaggatgtgga 666

                                                                       
Query: 467 attcaaagctgaggtttagtgaggactgttagatggtccaatttggaatgttaatagttt 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 667 attcaaagctgaggtttagtgaggactgttagatggtccaatttggaatgttaatagttc 726

                                                                       
Query: 527 gtgttactttcccctctaggaataagcaatatcagaatgtgaatgtcctaatgcttttag 586
           ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 727 gtgttactttctcctctaggaataagcaacatcagaatgtgaatgtcctaatgcttttag 786

                                                
Query: 587 gaaaacttgtttgtgtaaagatgtttcatgctttaat 623
           |||||||||||||||||||||||||||||||||||||
Sbjct: 787 gaaaacttgtttgtgtaaagatgtttcatgctttaat 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)