Query= MSMg01no507_a12.b1 MSMg01no507_a12.b1 CHROMAT_FILE:
MSMg01no507_a12.b1 PHD_FILE: MSMg01no507_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:26 2005
(413 letters)
>mm_chr6_88895984_88896796
Length = 813
Score = 739 bits (382), Expect = 0.0
Identities = 400/406 (98%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 5 gaattccctctcatttcccacgaaggcctgtgcttccagacactgacactttgaatggca 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattccctctcattggccacgaaggcctgtgcttccagacactgacactttgaatggca 358
Query: 65 tttgttgttgtctttcttcctgtttcaaaggtggcacatgttcattgtggagtattttca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttgttgttgtctttcttcctgtttcaaaggtggcacatgttcattgtggagtattttca 298
Query: 125 aaggaggaaaaaaacaaagtggagaaaataaaatcaatgtatgcatcaaccacatcattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aaggaggaaaaaaacaaagtggagaaaataaaatcaatgtatgcatcaaccacatcattt 238
Query: 185 acaaatgtgtattcatgcgtctttgtacgcacatgtgtatgtgtgctcacgcatatgtgg 244
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 237 acaaatgtgtattcatgcgtctgtgtacgcacatgtgtatgtgtgctcacacatatgtgg 178
Query: 245 ggtccagaggcgaatgttgactaccttcctcaatggattcccactgtatttcttgagtct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ggtccagaggcgaatgttgactaccttcctcaatggattcccactgtatttcttgagtct 118
Query: 305 tagtgaagtgtttgctgccatggtttatttcagtacaagtggagtgacagggataacttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tagtgaagtgtttgctgccatggtttatttcagtacaagtggagtgacagggataacttg 58
Query: 365 agttcaatccttagcacccacattaaatg-gtgtgtgtgtgtgtgt 409
|||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 57 agtttaatccttagcacccacattaaatgtgtgtgtgtgtgtgtgt 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_a12.g1 MSMg01no507_a12.g1 CHROMAT_FILE:
MSMg01no507_a12.g1 PHD_FILE: MSMg01no507_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:26 2005
(593 letters)
>mm_chr6_88709048_88710040
Length = 993
Score = 1116 bits (577), Expect = 0.0
Identities = 583/585 (99%)
Strand = Plus / Plus
Query: 9 ctgaggagagccagggcaggaactcaaatgggtgggaacctggagagaggagctggtgga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ctgaggagagccagggcaggaactcaaatgggtgggaacctggagagaggagctggtgga 268
Query: 69 gacgccatggagaagggctgctttctggcctgctcattgtggtttgctcagcccgctttc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gacgccatggagaagggctgctttctggcctgctcattgtggtttgctcagcccgctttc 328
Query: 129 ttatagaacctaggaccaccagcctaggaaggacaccacccacagtgggctgggcccttc 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttatagaacctaggaccaccagcctaggaaggacaccacccacagtgggctgggcccttc 388
Query: 189 cacatcactaagaaaatgctctaccggcgtgcctatagcctgatcttacggaggcaagtt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cacatcactaagaaaatgctctaccggcgtgcctatagcctgatcttacggaggcaagtt 448
Query: 249 cttaactgacgctttctcccctcaggtgactatagtttgcatcaagttgaccaaaaccta 308
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ctcaactgacgctttctcccctcaggtgactatagtttgcatcaagttgaccaaaaccta 508
Query: 309 gccagcacagggcccttatctcgtttctgctattaaaaaaaaattctggaatttagaaat 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gccagcacagggcccttatctcgtttctgctattaaaaaaaaattctggaatttagaaat 568
Query: 369 taagggtgtggaaatcaaggtcggtggaggttcaggaacatgctatggagagcactgagc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 taagggtgtggaaatcaaggtcggtggaggttcaggaacatgctatggagagcactgagc 628
Query: 429 ccgaacccaggctttcattctgcctaggtttcattctgcgcacatctgtggctcctttac 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ccgaacccaggctttcattctgcctaggtttcattctgcgcacatctgtggctcctttac 688
Query: 489 ctgcggtgtcatctgaggtgggtggcagtaagctcatctccacttcacaggcagacaaac 548
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cttcggtgtcatctgaggtgggtggcagtaagctcatctccacttcacaggcagacaaac 748
Query: 549 tgaggctcagccagactagaccacctgaactgttaggaaaggaca 593
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tgaggctcagccagactagaccacctgaactgttaggaaaggaca 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
