NGGGGACTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
GCGCGGAATTCCAGGGTGTATCTTCTTCTACCTCAAACGATCGAAAATAA
AAATACTTTTATTTTTAACACTATGTATTTTCCATTTTGGTGAGTAAAAA
AGCAGATTAATTTGATTCATTTTTATGTCAAGGAAAAGAAGCAGTGTGCC
AAAAATACTTCAGTGATTTTCAAAACTATTTCTGAATTAAAGAATATAGA
TTCATAGCATGTAGCACCGTGAAGTGAATGAGTGACCTAAAGTCAGTCAG
CTGGAGACTGAGAAACTGAGATCAGGAGCCAAAGGCCTTAGACCTGCCTT
CCTAATCAAGAGTAAGGAGTGGCTCTGATGTGCTCTGGGTGCTTTGTCAT
TTAAAATGTTAACATTGTCAGTTTAATCACTTGTTCTTTGATAAAAAAAA
TAGATTTATTAAAATAAATTGTTGGGGGGTGGAGTTTATGCTACAAAAAA
TTTATCACTTTCTAACAGTCATTGAACTTACAGTCTCATCAAGGAGTTGG
GAATCAGACAACAACTCAGGGTCAGAGAAAGACATTGTACAGTTTCATCT
CATGAGTGCTAATGTAGGCAGATTAGATGGAAGACATCACAAAGACAGAA
GAAACCAAGCAGGAAGGGAGGAAGGGAGGGAGAGATAGAGGGAAGAGATG
GAAACATGTAAGAAAGGAGAGCAGACAGGAAGGAAGGAGGAAGGCAGGGA
GA

NNNCCCCATGCTGTGGGTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTTTGTTGTTGCTGCTGTTG
TTTAACTGTACAGACTGATCTGTGTGGGGGGGGGAGGGGGCAACTGNTAT
ATCANNNCCCNTCTTTTTCTCTCTCCCCTTCTCTGCCACATTCTCCTTCC
CCACCCCCCATTCTCTCCTACCCCTTACTATCCCTTCCTCTCCCTCCCAA
CACCTTTTTTTTTTCCTGTCTCCTCTTTCTCCCCCCTCCTTTCTCCATTT
TTTTAACCCCGCCTCTCCTTTTTTTTTTTCTCACAGCACACCCCCACTCT
CCCCCACCTCTCTTTTCTCTCCCCACCCCTTCATTCCCCCTTCTCTCTTC
TCTTCTCCTTCTTTCTTTACTCCCCCCCCCCCTCCCTCTTTTTCCCCCCC
TCCCTTTCTCCTCCTCCCTTTCTTTTCTCCTCCACCCTCTTTCCCCCCCC
CCCTCCCCTTCTTCCCCTCCTATTACCCCCTCCTTTTCTATTCTCTCCCT
TCCCCTTTTTTCTTTCACCCCCTCTTTCTCTTCCCCCCCTTCTTTTCCTT
TTCCCCCTCTTTCCCTCTCTTCTTCCCTCCCCCCTTCTCCTCTCCCCCTT
CTCTACTCACCCCCCCCTCTCTTTTCTTCATCTACCCCCCCTCTCTCACC
ACCACCTCTATCTATTCCCCCCCCTCTCCCCATTTTCTTTTTTACTCTTC
CTCCCTCCTCTCTCTCTTCCCCTTCCCCACCTCCTCCTCTCCCCACCCTA
CTCCCTCTCCTCTCTCCTTTTCTCATCTCCTCCAATCCTCCCCTTTTTTC
CTTCCCTCTTATTCCTCCTTTCTCN

Query= MSMg01no508_d16.b1 MSMg01no508_d16.b1 CHROMAT_FILE:
MSMg01no508_d16.b1 PHD_FILE: MSMg01no508_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:04 2005
         (665 letters)



>mm_chr6_15324511_15325568
          Length = 1058

 Score = 1002 bits (518), Expect = 0.0
 Identities = 551/566 (97%), Gaps = 7/566 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttctacctcaaacgatcgaaaataaaaatacttttatttttaacactatgtattttcca 60
           ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 559 cttctacctcaaatgatcgaaaataaaaatactttcatttttaacactatgtattttcca 500

                                                                       
Query: 61  ttttggtgagtaaaaaagcagattaatttgattcatttttatgtcaaggaaaagaagcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttttggtgagtaaaaaagcagattaatttgattcatttttatgtcaaggaaaagaagcag 440

                                                                       
Query: 121 tgtgccaaaaatacttcagtgattttcaaaactatttctgaattaaagaatatagattca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgtgccaaaaatacttcagtgattttcaaaactatttctgaattaaagaatatagattca 380

                                                                       
Query: 181 tagcatgtagcaccgtgaagtgaatgagtgacctaaagtcagtcagctggagactgagaa 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 379 tagcatgtagcaccgtgaagtgaatgagtgacctaaagtcagtcagttggagactgagaa 320

                                                                       
Query: 241 actgagatcaggagccaaaggccttagacctgccttcctaatcaagagtaaggagtggct 300
           |||||||||||||||||||||       |||||||||||||||||||||||| |||||||
Sbjct: 319 actgagatcaggagccaaagg-------cctgccttcctaatcaagagtaagaagtggct 267

                                                                       
Query: 301 ctgatgtgctctgggtgctttgtcatttaaaatgttaacattgtcagtttaatcacttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctgatgtgctctgggtgctttgtcatttaaaatgttaacattgtcagtttaatcacttgt 207

                                                                       
Query: 361 tctttgataaaaaaaatagatttattaaaataaattgttggggggtggagtttatgctac 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 206 tctttgataaaaaaaatagatttattaaaataaattgttggggggtggagttcatgctac 147

                                                                       
Query: 421 aaaaaatttatcactttctaacagtcattgaacttacagtctcatcaaggagttgggaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aaaaaatttatcactttctaacagtcattgaacttacagtctcatcaaggagttgggaat 87

                                                                       
Query: 481 cagacaacaactcagggtcagagaaagacattgtacagtttcatctcatgagtgctaatg 540
           |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  cagacagcaactcaggatcagagaaagacattgtacagtttcatctcatgagtgctaatg 27

                                     
Query: 541 taggcagattagatggaagacatcac 566
           ||||||||||||||||||| ||||||
Sbjct: 26  taggcagattagatggaagccatcac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1058
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1048
Effective search space:   686440
Effective search space used:   686440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)