Query= MSMg01no508_e01.b1 MSMg01no508_e01.b1 CHROMAT_FILE:
MSMg01no508_e01.b1 PHD_FILE: MSMg01no508_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:06 2005
(624 letters)
>mm_chr6_4357559_4358582
Length = 1024
Score = 1160 bits (600), Expect = 0.0
Identities = 615/620 (99%)
Strand = Plus / Plus
Query: 5 gaattccatagcatcttaagagactacgaatgtgcttaaagacacaagtggatgaatgat 64
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattccatagcaccttaagagactacgaatgtgcttaaagacacaagtggacgaatgat 264
Query: 65 aggagatgaagagacaatatggatatttgactctctggccatagaacccaacgcatacac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggagatgaagagacaatatggatatttgactctctggccatagaacccaacgcatacac 324
Query: 125 catactactgtactaagttgtgatgctaaaattggccagtagagggcataaaacacttcc 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 catactactgtactaagttgtgatgctgaaattggccagtagagggcataaaacacttcc 384
Query: 185 acctctacaattctcccccagcatcctttactactactggatggagccctttcagatgct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acctctacaattctcccccagcatcctttactactactggatggagccctttcagatgct 444
Query: 245 gagaaccagtaagcaagagaactgcttgagacaagaacactctgtaaacagagtccattt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 gagaaccagtaagcaagagaactgcttgagacaagaacactctgtaaacagagttcattt 504
Query: 305 cctttgccttagtgatcttatgtggaaacaaaatagtcatttgattcaccattggcatca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctttgccttagtgatcttatgtggaaacaaaatagtcatttgattcaccattggcatca 564
Query: 365 tctttcagtggaattccaccacaaagggctttgctgacagtgatagaagctggatgtaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctttcagtggaattccaccacaaagggctttgctgacagtgatagaagctggatgtaaa 624
Query: 425 agaacagaggcgggataaaatttcaccaacactaaattcttcctgtagtcaaactcactt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaacagaggcgggataaaatttcaccaacactaaattcttcctgtagtcaaactcactt 684
Query: 485 ccaagaaagagatgaaaatccctttctcttctctggccttcaccacgcagttttgtgcag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccaagaaagagatgaaaatccctttctcttctctggccttcaccacgcagttttgtgcag 744
Query: 545 tcctaggaccctaattctttcttatcttattagttttgcacagacctgtctatactgtca 604
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 745 tcctaggaccctaattctttcttatcttattagttttgcacagacctgtctctactgtca 804
Query: 605 tttcaaataaattttgaagc 624
||||||||||||||||||||
Sbjct: 805 tttcaaataaattttgaagc 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_e01.g1 MSMg01no508_e01.g1 CHROMAT_FILE:
MSMg01no508_e01.g1 PHD_FILE: MSMg01no508_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:06 2005
(148 letters)
>mm_chr6_4524686_4525233
Length = 548
Score = 275 bits (142), Expect = 1e-78
Identities = 145/146 (99%)
Strand = Plus / Minus
Query: 3 taccccacaggttcaaatgtttatgtgtattcatatgctttgtttccctctggtaaaatg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 taccccacaggttcaaatgtttatgtgtattcatatgctttgtttccctctggtaaaatg 289
Query: 63 tcatccccttgaatagtgatggtttttatggctatgaacaaattgcacaacttttcaatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tcatccccttgaatagtgatggtttttatggctatgaacaaattgcacaacttttcaatt 229
Query: 123 atgtaattgaaacatgaattttcaaa 148
|||||||| |||||||||||||||||
Sbjct: 228 atgtaattaaaacatgaattttcaaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 548
Length adjustment: 8
Effective length of query: 140
Effective length of database: 540
Effective search space: 75600
Effective search space used: 75600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
