Query= MSMg01no508_p01.b1 MSMg01no508_p01.b1 CHROMAT_FILE:
MSMg01no508_p01.b1 PHD_FILE: MSMg01no508_p01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:01 2005
(391 letters)
>mm_chr6_15849971_15850760
Length = 790
Score = 716 bits (370), Expect = 0.0
Identities = 385/390 (98%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 1 gcatgtgagagctggtcattccagcccttcactaactagttctcactggtgatggtaggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 549 gcatgtgagagctggtcattccagcccttcactaactagttctcactggtgatggtgggc 490
Query: 61 tcctgctccttttcatgtgttttcttctgacatctgaactgctagggaaagaatgttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tcctgctccttttcatgtgttttcttctgacatctgaactgctagggaaagaatgttact 430
Query: 121 gaggccttcagttcatcaaaagtcatagtagatctggctgctgaaggatatctcaggctt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gaggccttcagttcatc-aaagtcatagtagatctggctgctgaaggatatctcaggctt 371
Query: 181 taatccatttcacttttaaaacacagacattcaacacaaatgatccctgagccttcatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 370 taatccatttcacttttaaaacacagacattcaacacaaatgatccctgagcctttatga 311
Query: 241 gctatcttgtttctttttttcttttccaaaatcatgggtgatagcattacaatataatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gctatcttgtttctttttttcttttccaaaatcatgggtgatagcattacaatataatag 251
Query: 301 cagaacttttcctgccttgatgtaactcattccaataatggatggataaagtgtgtgtgt 360
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cagaactcttcctaccttgatgtaactcattccaataatggatggataaagtgtgtgtgt 191
Query: 361 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 390
||||||||||||||||||||||||||||||
Sbjct: 190 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 790
Length adjustment: 9
Effective length of query: 382
Effective length of database: 781
Effective search space: 298342
Effective search space used: 298342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_p01.g1 MSMg01no508_p01.g1 CHROMAT_FILE:
MSMg01no508_p01.g1 PHD_FILE: MSMg01no508_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:01 2005
(306 letters)
>mm_chr6_15764729_15765434
Length = 706
Score = 576 bits (298), Expect = e-169
Identities = 304/306 (99%)
Strand = Plus / Plus
Query: 1 aaatatgagaaactagaaatcctgaagctcgacgcctttctcgtgtaacaaacctggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatatgagaaactagaaatcctgaagctcgacgcctttctcgtgtaacaaacctggagc 260
Query: 61 accaagattcttcaaggggaatgacagttcataaaacatgcctgacagagagtgacatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaagattcttcaaggggaatgacagttcataaaacatgcctgacagagagtgacatgt 320
Query: 121 aaatcacctgaaattcatgggtccttattagctttatgtgttcaataattttgagagaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 aaatcacctgaaattcatgggtccttattagctttatgtgttcaataattctgagagaat 380
Query: 181 agtttgaaatggtgaactaaattaatttcaaaaatacaacagtctaaccatggaaatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtttgaaatggtgaactaaattaatttcaaaaatacaacagtctaaccatggaaatcct 440
Query: 241 ttggaaaatgcaaccatggtagtcctttgaaaatgtaacactaaccactcacaggacgtt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtaaaatgcaaccatggtagtcctttgaaaatgtaacactaaccactcacaggacgtt 500
Query: 301 ttcatt 306
||||||
Sbjct: 501 ttcatt 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 706
Length adjustment: 9
Effective length of query: 297
Effective length of database: 697
Effective search space: 207009
Effective search space used: 207009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
