AACTATAATTTGCGGCCGCAAAACGACNCACAATTCAAATATGATGCGCG
GAATTCCTCATTTCTCAAAGAGATCATCACAGNGTGATATATTCAAAAGT
CATGTTTAAGATGTATAAAAGACTTTTTCTTTTCATTTTTCTAATAAGAC
CAACTTGTAAGAGATGGGCTGCCCTTGTGGGATGAAGGGTGTGCCTAAGG
CTAAGCTACAGCTGGCTTTGGCAGATTGAAATGTGAGAAACCACTGTCAC
TTTTAATGCTACTTTTATGCTTTGGTCTCTTGTTTAAAATGTCATTAGGC
CTGTGTGTGGTATNNATCATTTTGGTCCTTTACAACTCAAACATAAAGAG
AGTCAGAAAAACTGACATAGACACAAAAGGCAATAGGAAATAGCAAGTGA
GTAGCAATGTCTAGGAGAGTTGAAAGACAACACAGAAGAGAGGGGAGAGA
GAGAGAGAGGAAGAGAGAGAGAGAGAGCCCTAGGCCCAGGAGGGCTTGCC
ATAAAAAATAATCAGGTGTGGGTTAGAGTCTGACCTTTCTCTTTCCACAC
TTTATTGAAAGTTTATGTAAAAGGAATTCCCTTCTAAGTAGGCATTGCTG
GAAAATCAAGCCTGGTGACCTTCATACGTAAAGTCAGGCTCCCAAGCTTT
GATATCGAATTTTGATTTGATTTTATATTTCCCCAGCTAAAAGCGTATAT
GAGTTTACCTTTGGGAGTGAAGAGAACATCTTCCTCCCAGAGTCAGT

ATTTATATGTTGCGGAGGCTTTGGGGCGCTTTTTCCAACATCGTTATGGG
ACACAAAGATTTCCTCCAAGAAAATCTTAATAAGTTTATAGAATTATTAC
AAAAAATGAATCAAATCTTGATTCATGCACAAGGTTCATGTGAAACTATA
ATTGGTAAGAAAAAATGTGGAATATAACTCGGACCCCCCCCAAAAATTCT
TTGTTTTTATGGGAAAACTTCTCTACTCATGTTCAATGGCAACCAACCTA
CCAAATTCCAAGTTTTTTGCGAACAAGACTGGATAACGTCTGCCGGGTCC
AAGAAGTCTTAATTAATCCTCGGTACTGGCCGGCTTTTTTGCCATCCTAT
TCCACCTTTTAATTTTTTCTTAGCAAGTCCCCGCAAGGATTTAACAATGG
TCGAACATTCCACTGTTCTTCTGCCTATTACCCTCGTCACCCTCCCATTT
ATTCCCGGATTCCATCGCCGATGTAAATTATACCCCGGGAATTATATACC
TGCCTCATAGTACCCTTTACTTCCATAAAATTTCTTTATCAATCCGGTTA
ATTCACGTAGGGTAATCTCAACATGGAGTTGTACTTTTGGGGTTTACTTC
GCACCTTCATATTATCGACCCCCCACCATGTTAAATCAACCTATTATAAC
TCCTTTCTGAACGCCTTATAAGCGTAGACGTGCGAGGAATAACATGAGGA
CGTGTTTTTTCCCTTCTCCTTTACCAGCATCGGCTTTTTTGGTCGCCGCA
TTTCGTATATGATATACCGTCATGCTTTGTCCCCTCACACGCCTCAAACT
CCTAGTTGAGGTGCCACTCTTTGCGTTACTGTTACGTTCACCATTGTTCC
CTACACCCCGCTTCACTTTTTCTTGGTAAACACATTCGCGTCCCCGCAGC
GTTTTCCTTTCCCTTTTATTATACCTACAGCAAN

Query= MSMg01no509_i11.b1 MSMg01no509_i11.b1 CHROMAT_FILE:
MSMg01no509_i11.b1 PHD_FILE: MSMg01no509_i11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:47 2005
         (672 letters)



>mm_chr6_80199980_80201051
          Length = 1072

 Score = 1181 bits (611), Expect = 0.0
 Identities = 655/674 (97%), Gaps = 10/674 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcacagngtgatatattcaaaagtcatgtttaagatgtataaaagactttttcttttca 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcacagtgtgatatattcaaaagtcatgtttaagatgtataaaagactttttcttttca 260

                                                                       
Query: 61  tttttctaataagaccaacttgtaagagatgggctgcccttgtgggatgaagggtgtgcc 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 tttttctaataagaccaacttgtaagagatgggcagcccttgtgggatgaagggtgtgcc 320

                                                                       
Query: 121 taaggctaagctacagctggctttggcagattgaaatgtgagaaaccactgtcactttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggctaagctacagctggctttggcagattgaaatgtgagaaaccactgtcactttta 380

                                                                       
Query: 181 atgctacttttatgctttggtctcttgtttaaaatgtcattaggcctgtgtgtggta--t 238
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 381 atgctacttttatgctttggtctcttgtttaaaatgtcattaggcctgtgtgtggtagtt 440

                                                                       
Query: 239 nnatcattttggtcctttacaactcaaacataaagagagtcagaaaaactgacatagaca 298
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 --accattttggtcctttacaactcaaacataaagagagtcagaaaaactgacatagaca 498

                                                                       
Query: 299 caaaaggcaataggaaatagcaagtgagtagcaatgtctaggagagttgaaagacaacac 358
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 499 caaaaggcaataggaaatagcaagtgagtagcaatgtctaggagagttgaaagacaatgt 558

                                                                       
Query: 359 agaagagaggggagagagagagagaggaagagagagagagagagccctaggcccaggagg 418
           |||||||||||||     | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agaagagagggga-----a-agagaggaagagagagagagagagccctaggcccaggagg 612

                                                                       
Query: 419 gcttgccataaaaaataatcaggtgtgggttagagtctgacctttctctttccacacttt 478
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gctttccataaaaaataatcaggtgtgggttagagtctgacctttctctttccacacttt 672

                                                                       
Query: 479 attgaaagtttatgtaaaaggaattcccttctaagtaggcattgctggaaaatcaagcct 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 attgaaagtttatgtaaaaggaattcccttctaagtaggcattgctggaaaatcaagcct 732

                                                                       
Query: 539 ggtgaccttcatacgtaaagtcaggctcccaagctttgatatcgaattttgatttgattt 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ggtgaccttcatacgtaaagtcaggctcccaagctttgatatcgaattttgatttgattt 792

                                                                       
Query: 599 tatatttccccagctaaaagcgtatatgagtttacctttgggagtgaagagaacatcttc 658
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tatatttccccacctaaaagcgtatatgagtttacctttgggagtgaagagaacatcttc 852

                         
Query: 659 ctcccagagtcagt 672
           |||||| |||||||
Sbjct: 853 ctcccacagtcagt 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)