Query= MSMg01no510_a22.b1 MSMg01no510_a22.b1 CHROMAT_FILE:
MSMg01no510_a22.b1 PHD_FILE: MSMg01no510_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:32 2005
(688 letters)
>mm_chr6_45285844_45286929
Length = 1086
Score = 1255 bits (649), Expect = 0.0
Identities = 678/689 (98%), Gaps = 4/689 (0%)
Strand = Plus / Plus
Query: 1 gatttggttattctttgttttttgtttgtttctttgttttttgttttctgtttttgcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatttggttattctttgttttttgtttgtttctttgttttttgttttctgtttttgcata 260
Query: 61 ataaactgaaaaaaccacttaatactttcccatagagtgactgggagctaaagtatcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaactgaaaaaaccacttaatactttcccatagagtgactgggagctaaagtatcagc 320
Query: 121 atgctgcagtttatagatggccattctgcctcccatgctgtacggaggatgcagacaact 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgctgcagtttacagatggccattctgcctcccatgctgtacggaggatgcagacaact 380
Query: 181 atgaaatacatgaagcagagcctggtggttctatcagctattgcctagatcacatgaaag 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 atgaaatacatgaagcagagcctggtggttctatctgctattgcctagatcacatgaaag 440
Query: 241 ctcagtcttattttgtacaggacaatggatgtttctatcgttttgatcactctgagtcca 300
||||||| || ||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 441 ctcagtcatagtttgtacaggacaattgatgtttctatagttttgatcactctgagtcca 500
Query: 301 tcataggcttagttttatgagcagcaaacttagctcagcctctccttctaaatatcctcc 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tcataggcttagttttatgagcagcaaacttagctcagcctctcct---aaatatcctcc 557
Query: 361 ctttcattaaaaatgcataaaa-tgcattttcttttatttaatacaatacaaatactctt 419
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 558 ctttcattaaaaatgcataaaaatgaattttcttttatttaatacaatacaaatactctt 617
Query: 420 cccaaacgttctacctcttttaaaacttctccaggacttgaatgtggatttatagattgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cccaaacgttctacctcttttaaaacttctccaggacttgaatgtggatttatagattgt 677
Query: 480 gtcttttcagaatatttaaatgcaagaagacatgcattagctcaacaaccctgaaggtca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gtcttttcagaatatttaaatgcaagaagacatgcattagctcaacaaccctgaaggtca 737
Query: 540 tttatacctgacgagtggtgagtgatgttcattgtggcattaacttgttgttgttgttgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tttatacctgacgagtggtgagtgatgttcattgtggcattaacttgttgttgttgttgt 797
Query: 600 taatgaccacatattattctacacaaaatctccaggaagtttcctgaaatgattatagtg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 taatgaccacatattattctacacaaaatctccaggaagtttcctgaaatgattatagtg 857
Query: 660 tgagctctcattcaagtaaggtctactcc 688
|||||||||||||||||||||||||||||
Sbjct: 858 tgagctctcattcaagtaaggtctactcc 886
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1086
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1076
Effective search space: 729528
Effective search space used: 729528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_a22.g1 MSMg01no510_a22.g1 CHROMAT_FILE:
MSMg01no510_a22.g1 PHD_FILE: MSMg01no510_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:32 2005
(650 letters)
>mm_chr6_45421354_45422403
Length = 1050
Score = 1210 bits (626), Expect = 0.0
Identities = 644/650 (99%)
Strand = Plus / Minus
Query: 1 acttcattaagttttctgttacttgcagctgaaggcatctttctgatagttttactatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 acttcattaagttttctgttacttgcagctgaaggcatctttctgatagttttactatgt 788
Query: 61 gccatacaatcgattagtgctgtgtaccttaattcctagttcaacctaatgaggttgatt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gccatacaatcgattattgctgtgtaccttaattcctagttcaacctaatgaggttgatt 728
Query: 121 atccacttcattattcacattttagtgataaacaaactgaagctttggacattaaattag 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 727 atccacttcattattcacattttagtgataaacaaactgaagctttagacattaaattag 668
Query: 181 agcatcagagtaacgcagaaggacattctggttaagtgtcttcatctcctcaacactata 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 agcatcagagtaacgctgaaggacattctggttaagtgtcttcatctcctcaacactata 608
Query: 241 gcctgtgttattaaactggtttactctgtaaactcagggagacgtatctaacagattctt 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gcctgtgagattaaactggtttactctgtaaactcagggagacgtatctaacagattctt 548
Query: 301 tgaatgcgttcgtatcagtatttttcatggttactttaacatttgctttactaaatgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgaatgcgttcgtatcagtatttttcatggttactttaacatttgctttactaaatgaat 488
Query: 361 gtggaatattggcaacaaggacttggattaacaataaatgataaatttagctggatgatc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 487 gtggaatattggcaacaaggacttggattaacaataaatgataaatttagctggataatc 428
Query: 421 catatatagatatataatattcatgttctgtctacaaagaaattggcatttaaatatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 catatatagatatataatattcatgttctgtctacaaagaaattggcatttaaatatact 368
Query: 481 cacaaacatgcacacgcacacacacacacaaacacaacagtctcaatctcaaattgtcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cacaaacatgcacacgcacacacacacacaaacacaacagtctcaatctcaaattgtcat 308
Query: 541 tgaaaagtagttcccttgtaccaggatattatgaaattttgcatagatttagctcatgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgaaaagtagttcccttgtaccaggatattatgaaattttgcatagatttagctcatgat 248
Query: 601 atctggaggagatttgtctaaatttaattcctaaggtttttgccttgtat 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 atctggaggagatttgtctaaatttaattcctaaggtttttgccttgtat 198
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
