Query= MSMg01no510_l09.b1 MSMg01no510_l09.b1 CHROMAT_FILE:
MSMg01no510_l09.b1 PHD_FILE: MSMg01no510_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:22 2005
(396 letters)
>mm_chr6_3997651_3998446
Length = 796
Score = 708 bits (366), Expect = 0.0
Identities = 385/396 (97%), Gaps = 8/396 (2%)
Strand = Plus / Plus
Query: 1 aacaacaacaacaacaacagcaacaacaaccagccctgaggacttctagaaacaggtaaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 aacaacaacaacaacaacagcaacaataaccagccctgaggacttctagaaacaggtaaa 260
Query: 61 atctgaaactgctaactcaatgttctccagactcctactcttagttttaatatagcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctgaaactgctaactcaatgttctccagactcctactcttagttttaatatagcagag 320
Query: 121 aattaatacagtaatacagttgtctaaacaggaattatttattgactggtgtacagtcct 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaatacagt--------tgtctaaacaggaattatttattgactggtgtacagtcct 372
Query: 181 tcagtacaaaacttgtagtgagaacacagccttctaaattaaaagagcaaaacacaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcagtacaaaacttgtagtgagaacacagccttctaaattaaaagagcaaaacacaaaga 432
Query: 241 atctgaccactcagaggcatcattccaaaggctaactaggaacattgttttgcaccttcc 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 433 atctgaccactcagaggcatcattccaaaggctaactaggaacattgtttggcaccttcc 492
Query: 301 cttcatcctttccaagattttataaagtaaataattgggaactttttccataacaatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cttcatcctttccaagattttataaagtaaataattgggaactttttccataacaatctc 552
Query: 361 tacatttctgtagttacatatgtcgattttcttgag 396
|||||||||||||||||| |||||||||||||||||
Sbjct: 553 tacatttctgtagttacacatgtcgattttcttgag 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_l09.g1 MSMg01no510_l09.g1 CHROMAT_FILE:
MSMg01no510_l09.g1 PHD_FILE: MSMg01no510_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:22 2005
(625 letters)
>mm_chr6_4161216_4162240
Length = 1025
Score = 978 bits (506), Expect = 0.0
Identities = 531/540 (98%), Gaps = 2/540 (0%)
Strand = Plus / Minus
Query: 1 aggaagcacctaggaaccaacattcatactggaatttagaacaaacctaacgattctgaa 60
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 538 aggaagcacctaggagccaacattcatactgggatttagaacaaacctaacgattctgaa 479
Query: 61 ggtcagcctgtagatgttggtcacctattttcatttctcattttcaccctggagttttga 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggccagcctgtagatgttggtcacctattttcatttctcattttcaccctggagttttga 419
Query: 121 acaaagtaatcctaaggacaggttgatattccattcatccagttaacctttgaagaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acaaagtaatcctaaggacaggttgatattccattcatccagttaacctttgaagaattc 359
Query: 181 aggtaggcagggaggcatcatagtatattttcattaacaggaagcaatcatttcatcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aggtaggcagggaggcatcatagtatattttcattaacaggaagcaatcatttcatcccc 299
Query: 241 agagttgttaatgagctgcaaactttgacagacccaaaacaaacattgtgttgacttttc 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agagttgaaaatgagctgcaaactttgacagacccaaaacaaacattgtgttgacttttc 239
Query: 301 ctgcttgggtgaaaaatgtcaaagaacatctagttttgtgggtaatgaaaatgtggtgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctgcttgggtgaaaaatgtcaaagaacatctagttttgtgggtaatgaaaatgtggtgta 179
Query: 361 tatacatgatgggatttaattcaatattgcaaagaataaagttatgaaatttttgaaaga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 178 tatacatgatgggatttaattcaatattgcaaagaataaagttatgaaattttttaaaga 119
Query: 421 ggagaagaaactggaaaatattacatttagtgagatgactctgtcagaaacgtaaagatc 480
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 118 ggagaagaaactggaaaatattacatttagtgagatga--ctgtcagaaacgtaaagatc 61
Query: 481 tcatccctgctcttctgtgcatatgcaaacttttaatgttgcgtgcatgtgaatgaaagt 540
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tcatgcctgctcttctgtgcatatgcaaacttttaatgttgcgtgcatgtgaatgaaagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
