NNNNCCCTTTGTGGNNNGNNNNNNCATCTAAAAATTTGCCGGGCCGGCTA
ATACGAACTCACTTTTTCTGGAAGNNAGGAGNNCCGCGGAAATNTTCTTT
GTTGTTAGNAACTTGAAATTNCNCANTNTTTNTCANNAATNNTGNNGGNA
ATTATTTTTGGNTNNTTTTTCCTTTNTTAATATAGNAGNNAGTTTTTTNT
GGGAGGNTNNTCTTTTAANATTTTTAATTTNTTTAAGAAATTACCTTAAA
GNNCCTTCTTTCNCCTTTTTTTTGGTTAATTTTCCCCTTTTAAAAATAAA
TTAAATTTCCTTTTTAAGGAATTAATTTTAAAGGCCCTTTTCCTTAATTT
CCAAAGGGGGTTGGGAAAAGGAAAACTTTGTTTTTTTTAAAAAAAAAAAT
AAATCCTTTTTTTTCCCTTGGGCCTTTCCCTTGTGAAAGGGGGTTGGGTG
TGGGGGCCTTTTTTGGGCCCCCCCCCCAAAAAATGGGGAAAAGGGGGCCT
TTTTCCCCTTTTTGTTGGGCCCCACAATTAAAAAAACACAACTATTTTTT
TTTTTTTTTCCCAGAGGGTTTTTTTTTTTAAAATAATGGGGGGGGAGGGG
GGGGGGCCCTCCCTCTTTTAATATAAAAAAAAANNNNNNNNNNNNNNTTT
TTTGTGGGAAACCCATTTGGGAATCCTCNCCTTAAAAAATAAAGGGGGGC
GCCCCGTGGGGGCGGCCATATTTTCTCCCAATAATTCCCCCCCACAACTT
ATTGTGGTGGCGCAAGAATTTAAATTTATAANTTAAATNGAAAAAAAAAG
AGGGGTTTTTCTTTTCTT

ATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAGCAGACCTGAGAACACAGTGCCATACAAG
TTAAAGCTGAAAGTAACCAAACCAACACGTTCAGGAAGAAGTGGAGACCT
CCATGTCTCTCAGAATTAAGTGGCATCCTATCAGAGAGAGGTTAAAAAAA
ATCAGTTGCTAAAGTGCAGAAAGACCTTGGATGATTGTAACTGTAAACCA
CCTGTGGCTTACATGAACCTGGTACTCCTGAAAGGCAGGCTGGGGCTGAA
AGAGACTAGACAGCTAGAAAAGAATGAGGCCAAGAAAATTTTTCTCTGAT
CAAGGCCGCAAAGTTTACTAAGAGTCTGTGCTTATAAAGGGGGAAGGCCC
ATCTCCTTTCCCCCCATCCCCCCACCCCCACTTCCCCACCAATCTATTCT
TGGTGCCTGGAGCCAGCCTGTAGGCTACTTGCAGGATAGGATGTGTCTCC
AGAATGTCTCAAGGGTCTCTCAGCAGGTAGCAGAGTCTCAGTAGTGCAGC
AGTAGTTGACATAACAATATAGCCATCTAAGTCAGAAGGCTACACCCCAG
GTGATCTCATATTCAGTGGTAGCAAAGTCTGAATCATCCTGCTTCAAGGC
TGGGGGAGGCTACAACTGAAGTTAAAAAAGAAAACCAGAGACACTAAAAC
TTATAGAGGAGAAAGTGGGGAAACGCCTCGAAGATATGGGCACA

Query= MSMg01no513_f12.g1 MSMg01no513_f12.g1 CHROMAT_FILE:
MSMg01no513_f12.g1 PHD_FILE: MSMg01no513_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:48 2005
         (581 letters)



>mm_chr6_80660657_80661636
          Length = 980

 Score = 1079 bits (558), Expect = 0.0
 Identities = 576/582 (98%), Gaps = 2/582 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agcagacctgagaacacagtgccatacaagttaaagctgaaagtaaccaaaccaacacgt 60
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 agcagacctgagaacacagtgccatacaaattaaagctgaaagtaaccaaaccaacacgt 260

                                                                       
Query: 61  tcaggaagaagtggagacctccatgtctctcagaattaagtggcatcctatcagagagag 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaggaagaagtggagacttccatgtctctcagaattaagtggcatcctatcagagagag 320

                                                                       
Query: 121 gttaaaaaaaatcagttgctaaagtgcagaaagaccttggatgattgtaactgtaaacca 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaaaaaaa-tcagttgctaaagtgcagaaagaccttggatgattgtaactgtaaacca 379

                                                                       
Query: 181 cctgtggcttacatgaacctggtactcctgaaaggcaggctggggctgaaagagactaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctgtggcttacatgaacctggtactcctgaaaggcaggctggggctgaaagagactaga 439

                                                                       
Query: 241 cagctagaaaagaatgaggccaaga-aaatttttctctgatcaaggccgcaaagtttact 299
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 cagctagaaaagaatgaggccaagacaaatttttctctgatcaaggccgcaaagtttact 499

                                                                       
Query: 300 aagagtctgtgcttataaagggggaaggcccatctcctttccccccatccccccaccccc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagagtctgtgcttataaagggggaaggcccatctcctttccccccatccccccaccccc 559

                                                                       
Query: 360 acttccccaccaatctattcttggtgcctggagccagcctgtaggctacttgcaggatag 419
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acctccccaccaatctattcttggtgcctggagccagcctgtaggctacttgcaggatag 619

                                                                       
Query: 420 gatgtgtctccagaatgtctcaagggtctctcagcaggtagcagagtctcagtagtgcag 479
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 620 gatgtgtctccagaatgtctcaagggtctctcaacaggtagcagagtctcagtagtgcag 679

                                                                       
Query: 480 cagtagttgacataacaatatagccatctaagtcagaaggctacaccccaggtgatctca 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cagtagttgacataacaatatagccatctaagtcagaaggctacaccccaggtgatctca 739

                                                     
Query: 540 tattcagtggtagcaaagtctgaatcatcctgcttcaaggct 581
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tattcagtggtagcaaagtctgaatcatcctgcttcaaggct 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space:   553870
Effective search space used:   553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)