Query= MSMg01no513_j06.b1 MSMg01no513_j06.b1 CHROMAT_FILE:
MSMg01no513_j06.b1 PHD_FILE: MSMg01no513_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:07 2005
(654 letters)
>mm_chr6_108727866_108728919
Length = 1054
Score = 1154 bits (597), Expect = 0.0
Identities = 627/651 (96%), Gaps = 22/651 (3%)
Strand = Plus / Plus
Query: 4 ggaattccaatctttatctccaacctgccaataggtgagcacatgacttcgagtttcctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaatctttatctccaacctgccaataggtgagcacatgacttcgagtttcctt 263
Query: 64 tcagttatcagtaatggggatgtggctagagatacagcttaatttatgcctgctgtctgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcagttatcagtaatggggatgtggctagagatacagcttaatttatgcctgctgtctgc 323
Query: 124 agcaccccgagaaattcatttctgaggcctgcactcaggtgaagccagaattttttgtta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcaccccgagaaattcatttctgaggcctgcactcaggtgaagccagaattttttgtta 383
Query: 184 cagaaacttcagcctgggacagaactgaggagatatttagcattaagttaagcatgttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagaaacttcagcctgggacagaactgaggagatatttagcattaagttaagcatgttgg 443
Query: 244 gggtaaaggagagaaggtgtatacacacacacacacacacacacacacacacacacacac 303
|||||||||||||||||||||| ||||| ||||||||||
Sbjct: 444 gggtaaaggagagaaggtgtat----------------------acacatacacacacac 481
Query: 304 acacacacacacacaccctgtagggcacacatgtgagaatgtaacaaggctgtcattttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acacacacacacacaccctgtagggcacacatgtgagaatgtaacaaggctgtcattttt 541
Query: 364 tagcacaactgacaccatgttagatgtaccattctgactttaaaacccagtatgtaggcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tagcacaactgacaccatgttagatgtaccattctgactttaaaacccagtatgtaggcc 601
Query: 424 caaacacctgctaaaagagggatagagagccgaatccatcaaagacccagcccacagtcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 caaacacctgctaaaagagggatagagagccgaatccatcaaagacccagcccacagtcc 661
Query: 484 caggaaagtccctaaatacgctaaccttgccttttgtcttctgtagttcctcttcttgct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caggaaagtccctaaatacgctaaccttgccttttgtcttctgtagttcctcttcttgct 721
Query: 544 acgtgaagtgtgacaaccaggatggggggtttgtacataagataaagggctataaggctt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 acgtgaagtgtgacaaccaggatggggggtttgtacataagataaagggctataaggctt 781
Query: 604 ggcaggctgcgtgatttgggcaggtgtcctgtgcagtcgccaggcacaata 654
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 782 ggcaggctgcgtgatttgggcaggtgtcctgtgcagtcgccagccacaata 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_j06.g1 MSMg01no513_j06.g1 CHROMAT_FILE:
MSMg01no513_j06.g1 PHD_FILE: MSMg01no513_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:07 2005
(645 letters)
>mm_chr6_108903369_108904413
Length = 1045
Score = 903 bits (467), Expect = 0.0
Identities = 476/479 (99%)
Strand = Plus / Minus
Query: 1 cttgctgggaagtctccaataccagtagtgcctcagctttgcatcccccatcaggaatta 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 479 cttgctgggaagtctccaataccagtagtgcctcagctttgcttcccccatcaggaatta 420
Query: 61 aaagaaggatggtagatgacctacttgtatcctcaagctgacacttttgaaaacattcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aaagaaggatggtagatgacctacttgtatcctcaagctgacacttttgaaaacattcct 360
Query: 121 tgactgcaaagacacttctacttttgtttcttctatgaagtatacatgcattattccctg 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 359 tgactgcaaagacacttctacttttgtttcttctctgaagtatacatgcattattccctg 300
Query: 181 gcccttggttgcagccctggggttatttttatcatggatgggttaaaaggagcctagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gcccttggttgcagccctggggttatttttatcatggatgggttaaaaggagcctagaga 240
Query: 241 ttagaaagtctctgtaatacctggaaattgaaagtcactggactggggatgtagctttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ttagaaagtctctgtaatacctggaaattgaaagtcactggactggggatgtagctttct 180
Query: 301 tggtagagttcttgcctagcatgcatgaggccctgggtttgatcttgagtactacataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tggtagagttcttgcctagcatgcatgaggccctgggtttgatcttgagtactacataaa 120
Query: 361 gtaggcatggtggcacaggcctacaatcttagccctccagaggtagaggcaggaggatca 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 119 gtaggcatggtggcacaggcctacaatcttagccctccaggggtagaggcaggaggatca 60
Query: 421 aaagcttaaagtcatccttggccaaacagtgagtcccagaccagcctgtgctaaatgag 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 aaagcttaaagtcatccttggccaaacagtgagtcccagaccagcctgtgctaaatgag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
