Query= MSMg01no515_c18.b1 MSMg01no515_c18.b1 CHROMAT_FILE:
MSMg01no515_c18.b1 PHD_FILE: MSMg01no515_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:22 2005
(682 letters)
>mm_chr6_34517111_34518194
Length = 1084
Score = 1222 bits (632), Expect = 0.0
Identities = 668/680 (98%), Gaps = 2/680 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttcctcttaa-aattttaccttttcactttaataaatgagacagttaaccca 63
|||||||||| ||| || ||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 884 gaattctttttctcagaataattttacctttttactttaataaatgagacagttcaccca 825
Query: 64 cccatccctagaataaacaaggtgtccactccctttgtttcctcacaggagacctcaggc 123
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 824 cccatccctagaataaacaaggtgtccactccctttgtttcctcacaagagacctcaggc 765
Query: 124 tcagggttcatatagtcctcaccattttagtctgctcaattctatgatacattttctgaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tcagggttcatatagtcctcaccattttagtctgctcaattctatgatacattttctgaa 705
Query: 184 gacatgctctgtcccaccctaagccccaaatgttttcagcacagacccaacagaacatct 243
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 704 gacatgctctgtcccaccctaagccccaaaagttttcagcacagacccaacagaacatct 645
Query: 244 catttctcagaaaatactgtacacaagactgtaaaa-atcctttggataattggtgcaaa 302
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 644 catctctcagaaaatactgtacacaagactgtaaaatatcctttggataattggtgcaaa 585
Query: 303 gagtggatttatagtccaagctgacataaatcagtctcagcatttatgggcagaaatgtt 362
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 584 gagtggatttatagtccaagctgacataaatcagtctcagcatttatgggcaaaaatgtt 525
Query: 363 aagttgcgtaattagtgtgcagcaactgcacattcttgacacgtttatctttgggagcct 422
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aagttgcgtaattagtgcgcagcaactgcacattcttgacacgtttatctttgggagcct 465
Query: 423 gaactctacacatgcatgaacacataaaaattccccacctgcgatacttctcctctgcct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gaactctacacatgcatgaacacataaaaattccccacctgcgatacttctcctctgcct 405
Query: 483 cttagaactgagagcactgctgtacagtatacagttttgcttttctaatttgaatagttt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cttagaactgagagcactgctgtacagtatacagttttgcttttctaatttgaatagttt 345
Query: 543 gcactaggccaccagaaagccaacctttgtacactgacgcaatcatatactcctccacag 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gcactaggccaccagaaagccaacctttgtacactgacgcaatcatatactcctccacag 285
Query: 603 tcttgggctatataaacaaggaggacagagtaacttgcttgaaatgtattgtatcttttt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tcttgggctatataaacaaggaggacagagtaacttgcttgaaatgtattgtatcttttt 225
Query: 663 tttctaatatatctatctgg 682
||||||||||||||||||||
Sbjct: 224 tttctaatatatctatctgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1084
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1074
Effective search space: 721728
Effective search space used: 721728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_c18.g1 MSMg01no515_c18.g1 CHROMAT_FILE:
MSMg01no515_c18.g1 PHD_FILE: MSMg01no515_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:22 2005
(683 letters)
>mm_chr6_34353618_34354700
Length = 1083
Score = 1305 bits (675), Expect = 0.0
Identities = 681/683 (99%)
Strand = Plus / Plus
Query: 1 ttgacaattattaacaatgaccaaggccttgatgatatagtttttaataagtaaaagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgacaattattaacaatgaccaaggccttgatgatatagtttttaataagtaaaagatt 260
Query: 61 aggttcaggctctctgagataaaggaattgagctaaagaatcaagctatcaaactgaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttcaggctctctgagataaaggaattgagctaaagaatcaagctatcaaactgaagc 320
Query: 121 tgaagaataaagactactgagaatcatcagggaacagagagagtacctggcaccagcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagaataaagactactgagaatcatcagggaacagagagagtacctggcaccagcagc 380
Query: 181 ttgcatctactactgactctgagtcattattaaatcattgccattcccattcccaccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcatctactactgactctgagtcattattaaatcattgccattcccattcccaccttt 440
Query: 241 ctcaggatcctcctcatggtgaggcaggacctctgcaaatgtgatgttgtgatttaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcaggatcctcctcatggtgaggcaggacctctgcaaatgtgatgttgtgatttaaatt 500
Query: 301 catatattatttaaaattatattaaatgctatacatttaaatttttatataatttttagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catatattatttaaaattatattaaatgctatacatttaaatttttatataatttttagt 560
Query: 361 ttacttgaagtattatttcttcttcctgttattatttaactttgtatttcttctaaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacttgaagtattatttcttcttcctgttattatttaactttgtatttcttctaaaatg 620
Query: 421 ttgccaataaaatatagaaaaacttacgtggagctgagaaaaaactgaaaacgacttgta 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgctaataaaatatagaaaaacttacgtggagctgagaaaaaactgaaaacgacttgta 680
Query: 481 aattgaaattctgccaggcatgatggcacatgcctttaatctcagcacctgggaggcaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aattgaaattctgccaggcatgatggcacatgcctttaatctcagcacctgggaggcaga 740
Query: 541 ggcaggtagagctatgtgattttgaggctagcctggtctatgtaatgagttctaggacag 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 ggcaggtagagctatgtgattttgaggctagcctggtctatgtagtgagttctaggacag 800
Query: 601 ccagggctatgtagagagaactgtgtaaaaagtaaattcttagtttagaattcttggttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccagggctatgtagagagaactgtgtaaaaagtaaattcttagtttagaattcttggttt 860
Query: 661 atgaatcaaggactctttggaca 683
|||||||||||||||||||||||
Sbjct: 861 atgaatcaaggactctttggaca 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space: 722129
Effective search space used: 722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
