NNNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCACCTGTTGCATACCGAATGGCAGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
GAGATTCCACCTCACACCAGTCAGAATGTCTAAGATGAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGT
TGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGTGGTT
CCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCC
TGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCC
ACTATGTTCATAGCAGCCTTATTTATAATAGACAGAAGCTGGAAAGAACC
CAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACA
CAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTA
GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTC
ACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCA
AAACCTAGGATACCCAAGATATAAGATACAATTTGCTNAACACATGAAAC
TCAAGAAAAATGAAGACTGAAGTGTGGACACTATACCCCTCCTTAGAAGT
GG

NNNAACTATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCTGTGTTACAAATTTA
TTCAGGAGTCCTAATAGACAGTGCAAACAAAACAAAACATGACTTTAGCT
CCAACACAATCAAGAGCCTACCAGTCTGAATCTTTACTCTAAACAATGGA
CATCTGTCAGCTAACGGTTCAAATCTCTGCTTTATCTTGCCTAAGTAGAC
ACAAGAAACCTTTTCCTTTCCTCTTGACAAGGATGATGTTGCTGTGTCTA
TCTTTTTTTAAAAAAATATTTTTATTAGGTATTTTCTTCATTTACATTTC
CAATGCTATCCCAAAAATCCCCCATAGCATCCCCCCCACTCCCCTACCTT
GGGCACTCAGTTCCAATGTTGTAATCATGATGCAACCCAGATCTCAGAAG
GCAGGAATAGGGTCAAAGCTGAAAGAATGTTACTGTTCTGAGTCACTGAT
GACATGGGTGATTATAGAGAAAGCAAATCTGCTGATGCAAAAGAGAAGGG
ATTTTTCAGAGAAGTCACAGACTTGAGTCCTTCACGCTTTCTTTGGCATA
ATTGATACAGCTTCTCTACCACTTTCCAGGGGTATGGAGTCATAGTGAAA
AGAACTGTGCCATTTGAATCCCCTTGTTCAAAGAAACCACAAATGAACAT
TTTTTTAAACTGCTTCTATGGTTACTCTAGNTCGGAGTACTTGGGTGGA

Query= MSMg01no516_m14.g1 MSMg01no516_m14.g1 CHROMAT_FILE:
MSMg01no516_m14.g1 PHD_FILE: MSMg01no516_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:39 2005
         (639 letters)



>mm_chr6_103329437_103330477
          Length = 1041

 Score =  882 bits (456), Expect = 0.0
 Identities = 494/510 (96%), Gaps = 8/510 (1%)
 Strand = Plus / Minus

                                                                        
Query: 135  ggttcaaatctctgctttatcttgcctaagtagacacaagaaaccttttcctttcctctt 194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 ggttcaaatctctgctttatcttgcctaagtagacacaagaaaccttttcctttcctctt 982

                                                                        
Query: 195  gacaaggatgatgttgctgtgtctatctttttttaaaaaaatatttttattaggtatttt 254
            ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981  gacaag---gatgttgctgtgtctatctttttttaaaaaaatatttttattaggtatttt 925

                                                                        
Query: 255  cttcatttacatttccaatgctatcccaaaaatcccccatagcatccccc---ccactcc 311
            ||||||||||||||||||||||||||||||||||||||||| | ||||||   |||||||
Sbjct: 924  cttcatttacatttccaatgctatcccaaaaatcccccataccctccccccctccactcc 865

                                                                        
Query: 312  cctaccttgggcactcagttccaatgttgtaatcatgatgcaacccagatctcagaaggc 371
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864  cctaccttgggcactcagttccaatgttgtaatcatgatgcaacccagatctcagaaggc 805

                                                                        
Query: 372  aggaatagggtcaaagctgaaagaatgttactgttctgagtcactgatgacatgggtgat 431
            |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 804  aggaatagggtcaaagctgaaagagtgtcactgttctgagtcactgatgacatgggtgat 745

                                                                        
Query: 432  tatagagaaagcaaatctgctgatgcaaaagagaagggatttttcagagaagtcacagac 491
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744  tatagagaaagcaaatctgctgatgcaaaagagaagggatttttcagagaagtcacagac 685

                                                                        
Query: 492  ttgagtccttcacgctttctttggcataattgatacagcttctctaccactttccagggg 551
            |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684  ttgagtccttcatgctttctttggcataattgatacagcttttctaccactttccagggg 625

                                                                        
Query: 552  tatggagtcatagtgaaaagaactgtgccatttgaatccccttgttcaaagaaaccacaa 611
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 624  tatggagtcatagtgaaaagaactgtgccatttgaatccccttgttcaaagaaaccataa 565

                                          
Query: 612  atgaacattttttt--aaactgcttctatg 639
            || |||||||||||  ||||||||||||||
Sbjct: 564  atcaacatttttttttaaactgcttctatg 535


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1041
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1031
Effective search space:   648499
Effective search space used:   648499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)