Query= MSMg01no517_n24.b1 MSMg01no517_n24.b1 CHROMAT_FILE:
MSMg01no517_n24.b1 PHD_FILE: MSMg01no517_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:06 2005
(562 letters)
>mm_chr6_76831875_76832836
Length = 962
Score = 1071 bits (554), Expect = 0.0
Identities = 557/558 (99%)
Strand = Plus / Minus
Query: 5 gaattccagacaagagttagacgggggtctcaaaagaaacacatttcacctgtgcaggct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gaattccagacaagagttagacgggggtctcaaaagaaacacatttcacctgtgcaggct 703
Query: 65 ttaagtgaattcaaggcaatggattccttctaggacaataggctacaaacaagaaagctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttaagtgaattcaaggcaatggattccttctaggacaataggctacaaacaagaaagctt 643
Query: 125 tttctttccctcctccccctttctttttcattttgattccattttttgtaagcatacctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tttctttccctcctccccctttctttttcattttgattccattttttgtaagcatacctg 583
Query: 185 ctgacttgtctgcctctggcatggggaaattaagagaacagtgtctgtttgcatgttaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctgacttgtctgcctctggcatggggaaattaagagaacagtgtctgtttgcatgttaga 523
Query: 245 cgagatgagatcaatgctgctggtccatcagtagcctcggaaggggacaggtgacaattt 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 522 cgagatgagatcaatgctgctggtctatcagtagcctcggaaggggacaggtgacaattt 463
Query: 305 ctgtcctgaggtggaacagagctgtcctttgcaacattctcttaaagttgggcaaagagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ctgtcctgaggtggaacagagctgtcctttgcaacattctcttaaagttgggcaaagagt 403
Query: 365 tcacactgtgatgttcacgggagtgggagggatggggaaaataaacttaactctacaaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tcacactgtgatgttcacgggagtgggagggatggggaaaataaacttaactctacaaaa 343
Query: 425 gcaaactctaatgcatgcaagaaccattaggttggcaggtatattcataagtgaaaaacc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gcaaactctaatgcatgcaagaaccattaggttggcaggtatattcataagtgaaaaacc 283
Query: 485 tggaagtgtaatggtagaacataaaacctgtactgcttctgtttgagtgcaaaactgtac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggaagtgtaatggtagaacataaaacctgtactgcttctgtttgagtgcaaaactgtac 223
Query: 545 tagccaatacgctgaagt 562
||||||||||||||||||
Sbjct: 222 tagccaatacgctgaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no517_n24.g1 MSMg01no517_n24.g1 CHROMAT_FILE:
MSMg01no517_n24.g1 PHD_FILE: MSMg01no517_n24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:06 2005
(423 letters)
>mm_chr6_76670585_76671408
Length = 824
Score = 789 bits (408), Expect = 0.0
Identities = 420/424 (99%), Gaps = 1/424 (0%)
Strand = Plus / Plus
Query: 1 accttagagctgatgtttatttgagatttgtctaaaactaaagccaagaggccaggactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttagagctgatgtttatttgagatttgtctaaaactaaagccaagaggccaggactt 260
Query: 61 tgtatttgtttcctgatccctcaatggtccaacatgctccctataggtgtgtcaatgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtatttgtttcctgatccctcaatggtccaacatgctccctataggtgtgtcaatgcct 320
Query: 121 ataaaaggatgcagctaaaaaggatgctcaagaaactttgatctcagccctgacaactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaaaggatgcagctaaaaaggatgctcaagaaactttgatctcagccctgacaactga 380
Query: 181 ctctgtgcgtacttctgatagcaggttgcatttacttatgccaaaaactgagatgctgat 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgtgcatacttctgatagcaggttgcatttacttatgccaaaaactgagatgctgat 440
Query: 241 gggtacaaaacacaaatttt-cagcctagactagaaaaagttcaccatgcaattgaagga 299
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 gggtacaaaacacaaatttttcagcctagactagaaaaagttcaccatgccattgaagga 500
Query: 300 aacacggtaatggataaaaatctacaaataactagagagatagttctgcaggtcaaagca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacacggtaatggataaaaatctacaaataactagagagatagttctgcaggtcaaagca 560
Query: 360 tttcctggccttctagaggacgtcttaagttctagaccaacctaagttgctatcactcat 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcctggccttctagaggatgtcttaagttctagaccaacctaagttgctatcactcat 620
Query: 420 ttag 423
||||
Sbjct: 621 ttag 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
