TCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAAGAGACAGTTGCCACATTACAGTCTCCTAATTTATACTATGCT
CACATGGCAGAAAGAGTGTATGGTATCACTATAGGCCTTTATAAAAACAT
TGTAATCATTTTGTAGACTTCACTACATCAACTAACTATATATTAACCAA
CTTCAAAATACTTTCTTATAAAAAATAGTGTTTCACACATGTTGGGGTAT
ACATTAAGCCTATTGCAGTATGTCAGATCATTATTTGTCATAACAATGTT
TTGCTATTGAATATACTTTAGAGTACTTGTTTTCCATATAAGGCTTAATG
GATACGGAATGTTAGTAAAAAAAAAAAAGTTTGTGATTGCTAATCTAATC
ATGTACATACAGGCTTTTATCCAAGGATCATGCTCTCATGGTTCCTGAGG
GAAGCAACTATCCCAGTCAACATGTAATGTATTATGCATATGTATTCATC
GCCCTAAACTGTATTCAACACAAAGAGGTGCACCGTGGTGTTTGAGTACC
TTCTAGAGTGGTTCATGCCAGTAGGCAAACGAGTTCCATTCTCTGTGCTC
CAAGATTGCATTGGAAGTCATCCAGGTAACCTTAGCTCAGCTGGATCTGA
AATCCCCTTGTGTGTCATCAGTGCATCTGCTGCTGACTCCCCTACAGAGT
GACGATGTGACTGAGTGCTGAACATTTTTGTAGAACATGCAAGGGCAGAA
ATGCATCAGATTTAGTGATGTGGACTTGAT

CCATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGCCCAAGAGAGGTAAATCGAGG
ACTTACTGTAGATGTATTTCCACTTTTCTGAGTAATCTCCAGATTGATTT
CCAGAGTGGTTATAGGAGTATACAATCCTCCCAGCAATGAAGGAGTGTTG
CTCTTTCTCTACATCCTCGGCAACATGTTCTGTCTCCTGAACTTTTGATA
ATAGCTACTCTGATCCATGTAAGGTAGAATCTCAGGGTTGTTTTGATGTA
CATTTCCCTGACAATTTAGGACTGTGAACATTTCTTTAAGTGCATCTTGA
CCATTTGAGACTCCTCTGTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTT
TTTTTTTTTTTTGGTTCCTTGGTTTTGGTTCCTTGGTTTTGGTTTGGGTT
TTTTTGGTGGTTTTTTTTGGTTTTTTTTTAATTTTTTATTAAGGATTTAG
CTCATTTATATTTCCAATGTATTACGAAAAGTCCCCCATACCCACCCACC
CCCACTCCTCTACCCAACCAATAACCCTTTTTGGCCCTGGCCTTCGCCTG
TATTGGGGCATATTATTTTTGCTGTCTCATGGGTCTCTCTTTTTTGTGAT
GGCCCAATATGTCATTTTTTGGTAATTTTTCCCTTGAACCATGAATTCTG
TGGGTATGGCCCCTTTATTACGGTGTTTTTTTTACAAGGTTTAAGACTTT
TTATTCTTTTTGTTTTTTTTTA

Query= MSMg01no518_b22.b1 MSMg01no518_b22.b1 CHROMAT_FILE:
MSMg01no518_b22.b1 PHD_FILE: MSMg01no518_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:26 2005
         (652 letters)



>mm_chr6_19895100_19896153
          Length = 1054

 Score = 1214 bits (628), Expect = 0.0
 Identities = 644/650 (99%), Gaps = 2/650 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagagacagttgccacattacagtctcctaatttatactatgctcacatggcag 64
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcaagagacagttgccacattacagtctcctaatttatactatgttcacatggcag 264

                                                                       
Query: 65  aaagagtgtatggtatcactataggcctttataaaaacattgtaatcattttgtagactt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagagtgtatggtatcactataggcctttataaaaacattgtaatcattttgtagactt 324

                                                                       
Query: 125 cactacatcaactaactatatattaaccaacttcaaaatactttcttataaaaaatagtg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cactacatcaactaactatatattaaccaacttcaaaatactttcttataaaaaatagtg 384

                                                                       
Query: 185 tttcacacatgttggggtatacattaagcctattgcagtatgtcagatcattatttgtca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttcacacatgttggggtatacattaagcctattgcagtatgtcagatcattatttgtca 444

                                                                       
Query: 245 taacaatgttttgctattgaatatactttagagtacttgttttccatataaggcttaatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taacaatgttttgctattgaatatactttagagtacttgttttccatataaggcttaatg 504

                                                                       
Query: 305 gatacggaatgttagtaaaaaaaaaaaa--gtttgtgattgctaatctaatcatgtacat 362
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 505 gatacggaatgttagtaaaaaaaaaaaaaagtttgtgattgctaatctaatcatgtacat 564

                                                                       
Query: 363 acaggcttttatccaaggatcatgctctcatggttcctgagggaagcaactatcccagtc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acaggcttttatccaaggatcatgctctcatggttcctgagggaagcaactatcccagtc 624

                                                                       
Query: 423 aacatgtaatgtattatgcatatgtattcatcgccctaaactgtattcaacacaaagagg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacatgtaatgtattatgcatatgtattcatcgccctaaactgtattcaacacaaagagg 684

                                                                       
Query: 483 tgcaccgtggtgtttgagtaccttctagagtggttcatgccagtaggcaaacgagttcca 542
           ||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||
Sbjct: 685 tgcaccgtggtgtttgagtaccttctagagtggttcatgtcactaggcagacgagttcca 744

                                                                       
Query: 543 ttctctgtgctccaagattgcattggaagtcatccaggtaaccttagctcagctggatct 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttctctgtgctccaagattgcattggaagtcatccaggtaaccttagctcagctggatct 804

                                                             
Query: 603 gaaatccccttgtgtgtcatcagtgcatctgctgctgactcccctacaga 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaaatccccttgtgtgtcatcagtgcatctgctgctgactcccctacaga 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1054
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1044
Effective search space:   670248
Effective search space used:   670248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)