Query= MSMg01no518_e14.b1 MSMg01no518_e14.b1 CHROMAT_FILE:
MSMg01no518_e14.b1 PHD_FILE: MSMg01no518_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:38 2005
(690 letters)
>mm_chr6_124215939_124217029
Length = 1091
Score = 1266 bits (655), Expect = 0.0
Identities = 679/687 (98%), Gaps = 1/687 (0%)
Strand = Plus / Plus
Query: 5 gaattcactcatatttacttcttctgtttctgaaata-atacttcattagaattgagtat 63
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattcactcaaatttacttcttctgtttctgaaatacatacttcattagaattgagtat 264
Query: 64 attcactcatagagaagcaaaatgtattcttcccggcaaatactgacctttgaccctccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attcactcatagagaagcaaaatgtattcttcccggcaaatactgacctttgaccctccc 324
Query: 124 actattcagtgactctcctctgcccttatttccctagtaaaagcaatggccagtggaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actattcagtgactctcctctgcccttatttccctagtaaaagcaatggccagtggaaat 384
Query: 184 aggcaggcatttgagagaaacagaaaggagaatgttctggaaacatcagatcctcacttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggcaggcatttgagagaaacagaaaggagaatgttctggaaacatcagatcctcacttc 444
Query: 244 tggtgttttccctttagaagctcttttgttctgtgagctctgctaatttttgcatatcaa 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 445 tggtgttttccctttagaagctcttttgttctgtgagctctgctaacttttgcatatcaa 504
Query: 304 acctacttgaactgagtttccatcatagacaagaaggagcctcactgatggaccccacac 363
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 505 acctacttgaactgagtttccatcatagacaagaaggagcctcactgatgtaccccacac 564
Query: 364 tctgcattgtacttaatgatttgtgtctcaacataagcttcaggaagcagatttactttt 423
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 tctgcattgtacttaatgatttgtatctcaacataagcttcaggaagcagatttactttt 624
Query: 424 attattatttgttatgtcttagttgcaatttctattgctgtgatcaaaccatgaagcaac 483
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 625 attattatttgttatgtcttagttgcaatttctattgctgtgatgaaaccatgaagcaac 684
Query: 484 ttgtgcatgaaacgtttatttaacttagccatcccggtcacaattcattgaggctcaggg 543
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 685 ttgtgcatgaaacgtttatttaacttagccatcccggtcacaatccattgaggctcaggg 744
Query: 544 caaaaacttgaggcaacaacctggagaccagagctgaagttaaggccatggagaaaccct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caaaaacttgaggcaacaacctggagaccagagctgaagttaaggccatggagaaaccct 804
Query: 604 gctcacacctcattaatcactcggtttgatttcttacacaccccaggaccacctacatgg 663
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 805 gctcacacctcattaatcactccgtttgatttcttacacaccccaggaccacctacatgg 864
Query: 664 gggtagcagcacccacaatgggcaagg 690
|||||||||||||||||||||||||||
Sbjct: 865 gggtagcagcacccacaatgggcaagg 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1091
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1081
Effective search space: 735080
Effective search space used: 735080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_e14.g1 MSMg01no518_e14.g1 CHROMAT_FILE:
MSMg01no518_e14.g1 PHD_FILE: MSMg01no518_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:39 2005
(624 letters)
>mm_chr6_124383977_124385000
Length = 1024
Score = 1168 bits (604), Expect = 0.0
Identities = 619/624 (99%)
Strand = Plus / Minus
Query: 1 agtgtggcgtcttaagcaccaggcaaaggagagcctgatgaatagaatggccaaggaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 agtgtggcgtcttaagcaccaggcaaaggagagcctgatgaatagaatggccaaggaagg 765
Query: 61 gtctgtgacatctgtggagtttgcactgggtcctggagaacatgagggtctgagagggta 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 764 gtctgtgacatctgtggagtttgcactgcgtcctggagaacatgagggtctgagagggta 705
Query: 121 gttaaggagagagacaagtgatgaggacattatgacgttgttaccccaaactttgattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gttaaggagagagacaagtgatgaggacattatgacgttgttaccccaaactttgattca 645
Query: 181 catctgtcacatggggaactttaaactctcttggtggttggcaccccaacgtgatgagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 catctgtcacatggggaactttaaactctcttggtggttggcaccccaacgtgatgagag 585
Query: 241 acagggatcaatgcttttttactttaatataaagtatatactgtgagttgctgtgctgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acagggatcaatgcttttttactttaatataaagtatatactgtgagttgctgtgctgct 525
Query: 301 gcaaagccttgctagctggtagctgaacaaagagaatccctaacaactgtggaatcacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gcaaagccttgctagctggtagctgaacaaagagaatccctaacaactgtggaatcacag 465
Query: 361 ggtaggaagtgggcgcccatgaaagtctcagaccctttcttcatcagggaagggttatgc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 464 ggtaggaagtgggcgcccatgaaagtctcagaccctttcttcatcagggaagagttatgc 405
Query: 421 tgagctgtggacagtgctttcaacagtgtccctatgatcacatgaaccatttgctaaaac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 404 tgagctgtggacagtgctttcaacagtgtccctatgatcacatgaaccatttgctaaatc 345
Query: 481 atcccttaatgttggctgcagtgatcacccaaggtcagagtttgctgtgtttagcaagat 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 344 atcccttaatgttggctgcagtggtcacccaaggtcagagtttgctgtgtttagcaagat 285
Query: 541 ctaatgggctttcgaggtcttgatttttgtctgtagctaatttaaaaattctcccaacct 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctaatgggctttcaaggtcttgatttttgtctgtagctaatttaaaaattctcccaacct 225
Query: 601 tctggtttatgctaatgaatcaga 624
||||||||||||||||||||||||
Sbjct: 224 tctggtttatgctaatgaatcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
