CCCCCAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATGAAATTGTAGACAAATGGATGAAAGTTGAAAATATTA
TCCTAAGTGAGGTAACTCAGTCACAAAAGATCACACATGGTATGTACTCA
CTGGTAAGTGGATATTAGCCAAAAAGAAACTTGGAATATCCATGATACAA
CTCATAGACCATATGAAACCCAAGAAGAAAGATCATACCAAAGTGTGGAT
GCTATAGTCCTACTCAGTAGGAGGAAGAGAGTAACCTCTGGGAAGTAGAG
GGAGAGAGGGATCTGGGAGGGAGAGAGGAAGTGGGGAGGGGACCAGTTCA
CATATGGGAAATATGAGGTATAAGTATTGAGGGTTAGAAATTTGGAATTC
ATAATTTTAACAGACTTTGATTTCCAGAGTATTTAGATCTCTGAGAGAAA
GAAAGAAATATTACTATCCAAGTGTATATTGAGAGGATCTGGAGAGATCT
CTCAGTGTCTAAGAGACGCTTGCTGCTTTCCCAGAGGACGAGAATTCTAT
TTTCAGGATCAACATGATGTTTTATAATTTGGCATACCCTCTTTTCAGTA
GGCCAGCTTCATTTACTTGCCTCCATGTGTACCAGATTATTTGCATGATA
CACATATATGCCTGCAAGCAAAATATTTATTTCCACACCCTTTTAATGTG
TCTGCTGGCCCTTCCAACCCTATTTCTTTATCCCCTATTGTTTGTCTCTT
AAG

NCCCTCTTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAACATTATGGATGTA
GCACAAGTCACATTAAACTGACGCAGTACCATGGTTACAAGTGTGTCAGG
TGGGCTTTCATGGGATAATAGTGACTACTCCTGTCTGGTGCAGTTAGAAA
GGCATCCGCATGTGGAGACTGTGGCCTGGGAAGAAAGCTGTGTGGAGCAC
TGGCAAAGGAGTTGCCGTTGTCTAGTCTTATTTGTATTGATAGACCATGC
AAAAGGAAAGGTTATTGTTCTCTTACATTTTTCAGATCCTACTTTTAATA
AAGGTTCTTAAATACGTTAACCACCCTTCTAGCCCACCACCCTCCAGAGG
TCGTGGGAACGAAGGGAAGATTACTAAGATGCAGGGGAAGTGGACCTGCT
TAGAAACAGTTCTTTGGAGCAAATCCAATTGCATTGTCAGGATATATATG
AGAAGTCCAGTTCAGTAGTGTCAGGGTAGCAAAGACGAGTCAGCAGGAGT
GACCAGGACTAGCAGGGATGTGAAGAGAGGTTCTCTGCTGTGCCTCTCTC
AAGGAAGTGAAGGACAGTGAAGACAAAGATTCAAGACCAACAAAGGACTG
CAAAGCTAGCTATGCAAGTCCACCTTCACCATCCATTGAGACTTCTTTAT
ACTCCCTCCAAACATCATGTGTCCTCCCATGGGCCTTGACTCTCACN

Query= MSMg01no521_f08.g1 MSMg01no521_f08.g1 CHROMAT_FILE:
MSMg01no521_f08.g1 PHD_FILE: MSMg01no521_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:38 2005
         (664 letters)



>mm_chr6_25029855_25030918
          Length = 1064

 Score = 1228 bits (635), Expect = 0.0
 Identities = 653/659 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   cattatggatgtagcacaagtcacattaaactgacgcagtaccatggttacaagtgtgtc 64
           |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 205 cattatggatgtagcacaagtcacattaaactgacgcagtcccacggttacaagtgtgtc 264

                                                                       
Query: 65  aggtgggctttcatgggataatagtgactactcctgtctggtgcagttagaaaggcatcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggtgggctttcatgggataatagtgactactcctgtctggtgcagttagaaaggcatcc 324

                                                                       
Query: 125 gcatgtggagactgtggcctgggaagaaagctgtgtggagcactggcaaaggagttgccg 184
           |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 325 gcatgtggaggctgtggcctgggaagaaagctgtgtggagcactggcaaagtcgttgccg 384

                                                                       
Query: 185 ttgtctagtcttatttgtattgatagaccatgcaaaaggaaaggttattgttctcttaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtctagtcttatttgtattgatagaccatgcaaaaggaaaggttattgttctcttaca 444

                                                                       
Query: 245 tttttcagatcctacttttaataaaggttcttaaatacgttaaccacccttctagcccac 304
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 tttttcagatcctacttttaataaaggttcttaaatacgttaaacacccttctagcccac 504

                                                                       
Query: 305 caccctccagaggtcgtgggaacgaagggaagattactaagatgcaggggaagtggacct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caccctccagaggtcgtgggaacgaagggaagattactaagatgcaggggaagtggacct 564

                                                                       
Query: 365 gcttagaaacagttctttggagcaaatccaattgcattgtcaggatatatatgagaagtc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcttagaaacagttctttggagcaaatccaattgcattgtcaggatatatatgagaagtc 624

                                                                       
Query: 425 cagttcagtagtgtcagggtagcaaagacgagtcagcaggagtgaccaggactagcaggg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagttcagtagtgtcagggtagcaaagacgagtcagcaggagtgaccaggactagcaggg 684

                                                                       
Query: 485 atgtgaagagaggttctctgctgtgcctctctcaaggaagtgaaggacagtgaagacaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgtgaagagaggttctctgctgtgcctctctcaaggaagtgaaggacagtgaagacaaa 744

                                                                       
Query: 545 gattcaagaccaacaaaggactgcaaagctagctatgcaagtccaccttcaccatccatt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gattcaagaccaacaaaggactgcaaagctagctatgcaagtccaccttcaccatccatt 804

                                                                      
Query: 605 gagacttctttatactccctccaaacatcatgtgtcctcccatgggccttgactctcac 663
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gagacttctttatactccctccaaacatcatgtgtcctcccatgggccttgactctcac 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)