NNNCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCACCTGAGGAATACCGAATGACTGAGAAGCACCTGAAAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCTT
GAGATTCCACCTCACACCAGTCAGAAATGGCTAAGATAAAAAATTCAGGT
GACAGCAGATGCTGGAGAGGATGTGGAGAAAGAGGAACACTCCTCCATTG
TTGGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCAGTCTGGTGGT
TCCTCAGAAAACTGAACATAGTACTACCAGCAGATCCAGCAATACCTCTC
CTGGGCATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACAGGCTC
CACTATGTTCACAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAAC
ACAGATGTCACTCAACAGAGGAATGGATACAGAAAATATGGTACATTTAC
ACAATGGAGTACTACTCAGCTATTAAAACAATTAATTTATGAGATTCATA
GGTAAATGGATGGATATGGAGAATATCACTCTGAGTGAGGTAACCCAGTC
ACAAACAAACTCACTTGATATGTACTCACTGATAAGTGGATATTAGCCCA
GAAACTTAGAATACCCAAGATTCAATTTGCNAAACACAAGAAAATCAAGA
AGAAGGAAGACCAACACNTGGATGCTTCATTCTTCCTTTAGAATAGGGAA
ACAAATACCCATGG

NGGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGCCTTCTGAAGAAAATCTT
ATTCAGTTTTATATCAACAATACATGTTTGCAATTATTTTTAGTGGAGAA
AATTCTAGAGATTTGTCCATTAGCAATTTCTTCAATAAATCTCATGTCTA
GAATTTGTTTTCATCTTTTAGGTTATAGCATTTGGCTCATTTCTTCTTGT
TCTGCCTGTTGTGTGTAGGGTGCATGTGTTTGTTCATGCTTACGGTGCCT
GTATGTGTGTGTATGGGTGCGTGGGCCACTGTGCCTGCATAAGGAGGCTA
GGGCAGGAGGCCATCCACTGCCATGACTGTTGACTTGGAGCAGGTGCTCT
CTGAGCCTGAAGCTGGTTGGCTGGGCTAGGCTGACTGCCCAGGTGAGCTC
TTGGGATCTGACAGCCCCACCCTGTAATGCTGTATTATAATTACTCTCAG
CTATGAACATTTTTGGTTATTCTTGTGTGTACTCGGGATTGGAACTCAGG
TCCTCATTATTGTAGAACAAGCACTCTTAACCTCTCAGCTACCTCCCCAG
CTCCTTCAACTTGCATTTCTAGCCCTCCTTTATATTTCAGTCTTGAATGA
TGCCTAGGAAAAAGATTCATTAAGCTAAAATGTCAGGCTGGGCGTGGTTT
CTCCAGCAGATACCTGAGAATGGAGAGGGAAAAGCAGCCCTTAGTAACTG
ACN

Query= MSMg01no522_e08.g1 MSMg01no522_e08.g1 CHROMAT_FILE:
MSMg01no522_e08.g1 PHD_FILE: MSMg01no522_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:50 2005
         (578 letters)



>mm_chr6_24376279_24377256
          Length = 978

 Score =  961 bits (497), Expect = 0.0
 Identities = 503/505 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgccttctgaagaaaatcttattcagttttatatcaacaatacatgtttgcaattattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgccttctgaagaaaatcttattcagttttatatcaacaatacatgtttgcaattattt 446

                                                                       
Query: 61  ttagtggagaaaattctagagatttgtccattagcaatttcttcaataaatctcatgtct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttagtggagaaaattctagagatttgtccattagcaatttcttcaataaatctcatgtct 386

                                                                       
Query: 121 agaatttgttttcatcttttaggttatagcatttggctcatttcttcttgttctgcctgt 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 agaatttgttttcatcttttaggttatatcatttggctcatttcttcttgttctgcctgt 326

                                                                       
Query: 181 tgtgtgtagggtgcatgtgtttgttcatgcttacggtgcctgtatgtgtgtgtatgggtg 240
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 tgtgtgtagggtgcatgtgtttgttcatgcttacagtgcctgtatgtgtgtgtatgggtg 266

                                                                       
Query: 241 cgtgggccactgtgcctgcataaggaggctagggcaggaggccatccactgccatgactg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgtgggccactgtgcctgcataaggaggctagggcaggaggccatccactgccatgactg 206

                                                                       
Query: 301 ttgacttggagcaggtgctctctgagcctgaagctggttggctgggctaggctgactgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttgacttggagcaggtgctctctgagcctgaagctggttggctgggctaggctgactgcc 146

                                                                       
Query: 361 caggtgagctcttgggatctgacagccccaccctgtaatgctgtattataattactctca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 caggtgagctcttgggatctgacagccccaccctgtaatgctgtattataattactctca 86

                                                                       
Query: 421 gctatgaacatttttggttattcttgtgtgtactcgggattggaactcaggtcctcatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  gctatgaacatttttggttattcttgtgtgtactcgggattggaactcaggtcctcatta 26

                                    
Query: 481 ttgtagaacaagcactcttaacctc 505
           |||||||||||||||||||||||||
Sbjct: 25  ttgtagaacaagcactcttaacctc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space:   549824
Effective search space used:   549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)