Query= MSMg01no523_c15.b1 MSMg01no523_c15.b1 CHROMAT_FILE:
MSMg01no523_c15.b1 PHD_FILE: MSMg01no523_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:59 2005
(663 letters)
>mm_chr6_53339053_53340115
Length = 1063
Score = 1094 bits (566), Expect = 0.0
Identities = 644/678 (94%), Gaps = 15/678 (2%)
Strand = Plus / Plus
Query: 1 attcttaaa-----gccaaataaattcaccttgctattttttcatttttc-ttttttaag 54
||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 186 attcttaaagctgtgccaaatgaattcaccttgctattttttcatttttctttttttaag 245
Query: 55 tatttaacagcagattttgcatactcagtgcattcagaggagaccaggccaaaggctaag 114
|||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||
Sbjct: 246 tatttaacagcagattttgcatacgcagtgcgttcagaggagatcaggccaaaggctaaa 305
Query: 115 aactcctccaaaggcagaaaagaggattttcatctgattcaggccctgcttgcagctgtc 174
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aactcctcaaaaggcagaaaagaggattttcatctgattcaggccctgcttgcagctgtc 365
Query: 175 tgctttccataatctctgcttgttctccaccaagagtataaacacttcctggtcacgtta 234
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 366 tgctttccataatctctgcttgttctccaccaagagtataaccacttcctggtcacgtta 425
Query: 235 cctatgttgttggcgagacagacaggttagctacaactctaggtcacttagtgggattct 294
||||||||||||| |||||| || ||||||||||||||||||||| ||||||| ||||||
Sbjct: 426 cctatgttgttggtgagacaaaccggttagctacaactctaggtctcttagtgagattct 485
Query: 295 tcaggttctttttgtccgtatatttgtctatatatttcgtccacatatttaaagttttgg 354
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tcaggttctttttgtccatatatttgtctatatatttcgtccacatatttaaagttttgg 545
Query: 355 tagaattttaaaatcacctcacaagattaaggaaaggaggtgagcccacaggtaacttgg 414
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 546 tagaatttaaaaatcacctcacaagattaaggaaaggaggtgggcccacaggtaacttgg 605
Query: 415 acaagtgtgctttccgtgagttcttggctactgtcacagggtgtcactgaacgcacacag 474
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 606 acaagtgtgcttcccgtgagttcttggctactgtcacagggtgtcactgaactcacacag 665
Query: 475 cgagctgagcatgggcgacacagtccatgcagagacgtg---------gaagatggttaa 525
||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 666 cgagctgagcatgggcgacacagtccatgcagagacgtgtagaacgcggaagatggttaa 725
Query: 526 aggggacacccagctagatgtgctgtgacctgaaattccagacgctttaactggacgttt 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 726 aggggacacccagctagatgtgctgtgacctgaaattccagacgctttaactggaggttt 785
Query: 586 taagaggctttgataattttctgtttccaagcctttgactcttcctatgcgtatgattat 645
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 taagaagctttgataattttctgtttccaagcctttgactcttcctatgcgtatgattat 845
Query: 646 aataatccttctccatcc 663
||||||||||||||||||
Sbjct: 846 aataatccttctccatcc 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_c15.g1 MSMg01no523_c15.g1 CHROMAT_FILE:
MSMg01no523_c15.g1 PHD_FILE: MSMg01no523_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:59 2005
(395 letters)
>mm_chr6_53504269_53505063
Length = 795
Score = 710 bits (367), Expect = 0.0
Identities = 388/395 (98%)
Strand = Plus / Minus
Query: 1 tctacctgtggtgtcttattaacactataaaaactccatacttgtgcctagtgagataac 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 763 tctacctgtggtgtcttattaacactataaaaactccattcttgtgcctagtgagataac 704
Query: 61 tagtggtgtttgctcccaaggttgctgactcaatgaagttcagtctctaagaatccacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tagtggtgtttgctcccaaggttgctgactcaatgaagttcagtctctaagaatccacat 644
Query: 121 catggaatgaaagaactgactcccactgggtgtcccatgatctccccaaatatgaatcat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gatggaatgaaagaactgactcccactgggtgtcccatgatctccccaaatatgaatcat 584
Query: 181 gaaataagtccctatcattacataaatctaatatttttagactttcgtattttagcaggt 240
|||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaaataagtccccatctttatataaatctaatatttttagactttcgtattttagcaggt 524
Query: 241 gttttggcacatacgcattcagaaggcttgggcaggagaaccctgggttggagccatccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gttttggcacatacgcattcagaaggcttgggcaggagaaccctgggttggagccatccg 464
Query: 301 cgctatatagtagtatctcaccaccaaaacgaaaagttcagatttatttatatttagaat 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cgctatatagtagtacctcaccaccaaaacgaaaagttcagatttatttatatttagaat 404
Query: 361 gttcatcatagagatgcttaagcagtataaaagca 395
||||||||||||||||||||| |||||||||||||
Sbjct: 403 gttcatcatagagatgcttaaacagtataaaagca 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
