Query= MSMg01no524_b17.b1 MSMg01no524_b17.b1 CHROMAT_FILE:
MSMg01no524_b17.b1 PHD_FILE: MSMg01no524_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:16 2005
(640 letters)
>mm_chr6_14953895_14954935
Length = 1041
Score = 1156 bits (598), Expect = 0.0
Identities = 619/626 (98%), Gaps = 1/626 (0%)
Strand = Plus / Minus
Query: 13 gaatt-caattcccataaacatgctcaaaaatattaatggtctatcgccctgaagataaa 71
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 838 gaattccaattcccataaacatgcttaaaaatattaatggtctatcgccctgaagataaa 779
Query: 72 taacaatgtggccatattttattttgattattcactatttttctttaaatgtaataatcg 131
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 778 taacaatgtggccatattttattttgattattcactatttttctttaagtgtaataatcg 719
Query: 132 tgtacctaattagtcaaaatcatctcctataataaaggttcagaatatgagaatggccct 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tgtacctaattagtcaaaatcatctcctataataaaggttcagaatatgagaatggccct 659
Query: 192 ctccaaataaagtcttcacattgcttcctgcagacctgctaagaatgaaagaccaaggca 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctccaaataaagtcttcacattgcttcctgcagacctgctaagaatgaaagaccaaggca 599
Query: 252 agagacaaaaattcaccttgaattgaaatataaatagagaacttatttgtctgaaaagaa 311
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 598 agagacaaaaattcaccttgaattgaaatataaattgagaacttatttgtctggaaagaa 539
Query: 312 catcaaattgttttcaattagtgaatgttttattaaattcagaccatatcagtattactc 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 catcaaattgttttcaattagtgaatgttttattaaattcagaccatatcagtattactc 479
Query: 372 cagtattggtgttatggtttcaaaatgaacgtgataatttcacagttaggagagttggga 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cagtattggtgttatggtttcaaaatgaacgtgataatttcacagttaggagagttggga 419
Query: 432 aataagatgactccttatgaagttgatttgtttaatctaatgaaaataagttatttttag 491
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aatgagatgactccttatgaagttgatttgtttaatctaatgaaaataagttatttttag 359
Query: 492 ataagaatatacaaatacattaaaacatcacaatgattgccattaaccttgatatggaaa 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ataagaatatacaaatacattaaaacatcacaatgattgccattaaccttgatatggaaa 299
Query: 552 cttccaaaattaagtttcttaagttgtcacaattcatattctctgtatatgttttaattc 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cttccaaaattaagtttcttaagttgtcacaattcatattctctgtatatgttttaattc 239
Query: 612 aaggggatatatttaaaacaataaga 637
|||| |||||||||||||||||||||
Sbjct: 238 aaggagatatatttaaaacaataaga 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_b17.g1 MSMg01no524_b17.g1 CHROMAT_FILE:
MSMg01no524_b17.g1 PHD_FILE: MSMg01no524_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:16 2005
(537 letters)
>mm_chr6_14903805_14904741
Length = 937
Score = 1031 bits (533), Expect = 0.0
Identities = 536/537 (99%)
Strand = Plus / Plus
Query: 1 taaggattcaaactctataatctttatacttgcacagtaagagcattcatcactgagcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaggattcaaactctataatctttatacttgcacagtaagagcattcatcactgagcca 260
Query: 61 tctctcaggctctccttctttacacttacatagaggttaccagatgctgaagacaagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctcaggctctccttctttacacttacatagaggttaccagatgctgaagacaagtct 320
Query: 121 gacctgacatgttaaaaagaaacatgcatgtatagttttaaagtattagaattgtgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacctgacatgttaaaaagaaacatgcatgtatagttttaaagtattagaattgtgaaaa 380
Query: 181 tttattcttcagagctctatgaattttgtggaaacgttgggtgcatttgtgcccattatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttattcttcagagctctatgaattttgtggaaacgttgggtgcatttgtgcccattatt 440
Query: 241 cacagaggagtttgtactcatctcttcatgtccattacctctatgatcacaagccagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagaggagtttgtactcatctcttcatgtccattacctctatgatcacaagccagcag 500
Query: 301 tatcaaatatatgagaaatgaagccctttgaggggaaggacatattaaatacttttatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatcaaatatatgagaaatgaagccctttgaggggaaggacatattaaatacttttatat 560
Query: 361 tattcatgcatgtaaaataagctcttcagtttcaaaactaaaatttattttctttgttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattcatgcatgtaaaataagctcttcagtttcaaaactaaaatttattttctttgttag 620
Query: 421 ggttcttaccattgaacatatgtctttacagcaaagtaaaaaaatggtttccagcattat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttcttaccattgaacatatgtctttacagcaaagtaaaaaaatggtttccagcattat 680
Query: 481 aacagattgcaaaatcaatactaaattataaattaatgaaaattattattatcttta 537
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 681 aacagattgcaaaatcaatactaatttataaattaatgaaaattattattatcttta 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
