XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAA
AAAGTTTTTAATTTTTTATTTCTTCCCTGGAACCAGTGATCACTGAATAG
AATGTTATTTAGTTTCTATGTGCATGTAGGCTTTCTGTTGTTCTGTTGTT
GAAGTTTAACTTTAAATTATGGTGGTCTGATAGCATATAAGGAATTATTT
AAAATTTCTTGAACATTTTCAGGCTTGCTTTGTGACCCAGTATATGATCA
CTTTTGGAGAAGATTCCATGAGGTTCTGAGAAGAAGGTACATTCTTCTGT
ATTTAGATGAAATGTTCTATAGATATCTGTTAGGTCCATTTGATTCAAAA
CCTCTGTTAGTTTCATTATTTCTCTGTTTAGTCTCTGGCTTGATGACCTG
GTGAGAGTGGGTATTGAAGTTTCCCAATGTGTGATTTAAGTTTTAGTAAT
ATTTCTTTTATGAATGTGATTTTTCTTATATTTGGAGCATAGCTGTTCAG
AATAAGATGCCATCTTGGTGGATTTTTTTCGTTTGATGAGTATGAAATGC
CTTTTTGCACCTCTTTTGAATATTTCTGGTTGATTTTGGACTATTTTATT
GTATATTAGAATGGCTACTCCAGCATGTTTTGTGGGTTCATTTGCTTGGA
AAACTTTTTTTCCAGCCCTTTACTCTGAGGGAAATCTATCTTTTTTTGCT
GAAAAATGTTTCTTCTATGTAGCAGAATGATTGATCCTGATAAAGTATAC
ATTCAGTGTTN

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXAATACACAACATATACAAACATACAGGACACA
ATGAAGGTGGTTTTAAGAGGCAAGATCATCAATGTGAACTTTTATTTATG
CCAATTCCCCATATAAAAATTTCAAAAGGTCACATACTAGCATCATAGCA
GTCCATCTAGTAGCCCTAGGACAAAAAGATGAAATCATATTAAAAAAAGA
AAAGAATTGCTAAAAAGAAATAATCAAATTCAGGTCTGAAATCAATAAAA
CAGAAACGAACAAAAGAATGGAAAACAACAATGAAGTGACTAGTTGAGAA
AATCAATAAGATTGATAAACTCATCCAAATAAACTAAAAGGTGAAGATAG
AATAGCCCATTGCATTTTTAATTAAAACTTTAGTATAAAGAACTTGTAAA
CAAGTCTAAAAGTCACACAATTAAGAAACAAGATCAGAAATCTATGTATT
TCAATGATCTTCTACACATTTAGAATAGCCATCCTGAACCTGTAGGTTTC
CAATTAGATTTAAAATTTTCATTATCACATACTTTACGTGACATTATTTA
CACAAAACTCAAATGTTCACTATAGATGTAAACACTAGAACAACCAACTT
ATCCTCATTCATAATTAAAATGCCGAGTATCTGTTTAGTCATTTTCTCAT
CATTCAATACTTACCTTCTATTGTTCTGCTGTCTAATATTATAGTGTTCC
TACACAAAATTCT

Query= MSMg01no524_p16.g1 MSMg01no524_p16.g1 CHROMAT_FILE:
MSMg01no524_p16.g1 PHD_FILE: MSMg01no524_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:25 2005
         (605 letters)



>mm_chr6_25275118_25276122
          Length = 1005

 Score =  878 bits (454), Expect = 0.0
 Identities = 463/466 (99%)
 Strand = Plus / Minus

                                                                        
Query: 140  tagtagccctaggacaaaaagatgaaatcatattaaaaaaagaaaagaattgctaaaaag 199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1005 tagtagccctaggacaaaaagatgaaatcatattaaaaaaagaaaagaattgctagaaag 946

                                                                        
Query: 200  aaataatcaaattcaggtctgaaatcaataaaacagaaacgaacaaaagaatggaaaaca 259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945  aaataatcaaattcaggtctgaaatcaataaaacagaaacgaacaaaagaatggaaaaca 886

                                                                        
Query: 260  acaatgaagtgactagttgagaaaatcaataagattgataaactcatccaaataaactaa 319
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 885  acaatgaagtgactagttgagaaaatcagtaagattgataaactcatccaaataaactaa 826

                                                                        
Query: 320  aaggtgaagatagaatagcccattgcatttttaattaaaactttagtataaagaacttgt 379
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825  aaggtgaagatagaatagcccattgcatttttaattaaaactttagtataaagaacttgt 766

                                                                        
Query: 380  aaacaagtctaaaagtcacacaattaagaaacaagatcagaaatctatgtatttcaatga 439
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 765  aaacaagtctaaaagtcacactattaagaaacaagatcagaaatctatgtatttcaatga 706

                                                                        
Query: 440  tcttctacacatttagaatagccatcctgaacctgtaggtttccaattagatttaaaatt 499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705  tcttctacacatttagaatagccatcctgaacctgtaggtttccaattagatttaaaatt 646

                                                                        
Query: 500  ttcattatcacatactttacgtgacattatttacacaaaactcaaatgttcactatagat 559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645  ttcattatcacatactttacgtgacattatttacacaaaactcaaatgttcactatagat 586

                                                          
Query: 560  gtaaacactagaacaaccaacttatcctcattcataattaaaatgc 605
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585  gtaaacactagaacaaccaacttatcctcattcataattaaaatgc 540


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)