Query= MSMg01no525_h13.b1 MSMg01no525_h13.b1 CHROMAT_FILE:
MSMg01no525_h13.b1 PHD_FILE: MSMg01no525_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:06 2005
(629 letters)
>mm_chr6_115364043_115365071
Length = 1029
Score = 944 bits (488), Expect = 0.0
Identities = 503/508 (99%)
Strand = Plus / Minus
Query: 4 ggaattcattttgctgtcaaatgtcttcttgcttcatttatagattttacatttttaaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggaattcattttgctgtcaaatgtcttcttgcttcatttatagattttacatttttaaac 449
Query: 64 ctagtttctagggcttttctggtgttaacagtccctacccccaccatgacatagcccctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctagtttctagggcttttctggtgttaacagtccctacccccaccatgacatagcccctt 389
Query: 124 gttcttatgagaataataatattactatgagaacatttctttgtggcaataaaattctag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttcttatgagaataataatattactatgagaacatttctttgtggcaataaaattctag 329
Query: 184 ttaaaaaaaagtatcttagagctgcacagaatttttatttccagtttgaagctaggaggt 243
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttaaaaaaaagtatcctagagctgcacagaatttttatttccagtttgaagctaggaggt 269
Query: 244 tatctaaagcaaaatgagaacataatagcaactatttaacagagcttcagtatggagccg 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tatctaaagcaaaatgagaacataatagcaactatttaacagagcttcagtatggagccc 209
Query: 304 ggggagggggtagaggtgttgatcagaggtagagaacttgcctagcatgtgtgagggtct 363
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 208 ggggagggggtagaggtgttgatcagaggtagagaacttgcctagcgtgtgtgagggtct 149
Query: 364 aggtacaatcctcagcaatacagaaaagtggggaaagaagtttgtatgtgtttttactca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aggtacaatcctcagcaatacagaaaagtggggaaagaagtttgtatgtgtttttactca 89
Query: 424 gtgcaggagatcggggtttgcatttcagtgctggaactcacaaaagtccttactttgttg 483
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 gtgcaggagatcgggttttgcatttcagtgctggaactcacaaaagtccttactttgttg 29
Query: 484 tgtcttgttaaacctttgttccctcatc 511
||||||||||||||||||||| ||||||
Sbjct: 28 tgtcttgttaaacctttgttctctcatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_h13.g1 MSMg01no525_h13.g1 CHROMAT_FILE:
MSMg01no525_h13.g1 PHD_FILE: MSMg01no525_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:06 2005
(635 letters)
>mm_chr6_115221888_115222921
Length = 1034
Score = 1205 bits (623), Expect = 0.0
Identities = 632/635 (99%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1 agcatcccaggaggctcttggtgactggagacagatctcgtggtagccaaaccccacagg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 agcatcccaggaggctcttggtgactggagacagatcccgtggtagccaaaccccacagg 260
Query: 61 gaataagccctcagcccctagcagacagcaggcttgtgggaggagccagagtgtctcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaataagccctcagcccctagcagacagcaggcttgtgggaggagccagagtgtctcagc 320
Query: 121 ctggcaagggacagtcctaggggactctcctcctagcttccctcagcccctgagaagtct 180
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 321 ctggcaagggacagtcctaggggactctcctcctggcttcc-tcagcccctgagaagtct 379
Query: 181 tccatccccagcctcagtggaaccagggacaggagaaactcttcaggcgccatcaagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tccatccccagcctcagtggaaccagggacaggagaaactcttcaggcgccatcaagggt 439
Query: 241 agccaaggcacattcccaggctctggcctctctccccaaagccttgggaagggcactttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agccaaggcacattcccaggctctggcctctctccccaaagccttgggaagggcactttg 499
Query: 301 gggctcattttatccttgaatgtctcacgtgtgtatttctgtgactgaggagagccaggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggctcattttatccttgaatgtctcacgtgtgtatttctgtgactgaggagagccaggg 559
Query: 361 tcagcctgcatggtgggtgcctcctgtgaggcctgagggagagcactggcaagcaccagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcagcctgcatggtgggtgcctcctgtgaggcctgagggagagcactggcaagcaccagt 619
Query: 421 ctagatgcttcacatgacctcggaaagagactatcaataaggttgggaccagaaggcatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctagatgcttcacatgacctcggaaagagactatcaataaggttgggaccagaaggcatg 679
Query: 481 cattcttttaggacatgtggggaactgaaggctagaaaggttagttccactgtgctggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cattcttttaggacatgtggggaactgaaggctagaaaggttagttccactgtgctggag 739
Query: 541 caactgggaatcttggtataacatcttctactacatacagcattgtgaggtgtaaaggac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caactgggaatcttggtataacatcttctactacatacagcattgtgaggtgtaaaggac 799
Query: 601 aggtcacataaaggcccatttacgtgggacacagt 635
|||||||||||||||||||||||||||||||||||
Sbjct: 800 aggtcacataaaggcccatttacgtgggacacagt 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1034
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1024
Effective search space: 640000
Effective search space used: 640000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
