XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAC
CTCTTGAAAAAAAAATTATGTGCTATAAAATGACTTTTTTCTCATATATC
CATAACAAAGATAAGTTAAAATTTTGTTTTCATGCCTACAAAGTTAAAGT
TTAAGGTAATATTTAGACTTTATTTTAAGATAATATATTGCAATAAACCT
TTCCTCAAATTGGTCCTACCATCAGTTGGAGAAAAAAAAATTATGTATTA
AGAAAGATCAATCATAGTAGTATAAAATGGTGGTGAGCACACAGACTCCC
AACACTTGAGAGACTAGAGTTAGAGGCTAGACTGTCATCATGAAACCCTG
TGTTAACTAAAAAGTAAAATAAAACCAACAACAACCAAAAAGAATCATCT
TCGCTATGAACCTCTTGGTGATAGAGTTTACCTATATGGACAGATGAGTT
GCTGGATAGACTAAGTCAAAGAGAAATGCAGTCCATGGGCGTCAGAACAT
CCAGTTGTACAGACCTTGCTTAACAGACAAATCCAAGTCAGGTTAAAATT
GGAGGGATGGTGTTGGACCCATAGTCAAAAGCTCTGACCCAGAATTGTTC
TAGTCTAAAGGAACTACAGGGACAAAAATGGAGAAGAGCAAAAGAGAAAA
GAGGTTCAGTGACAGGCACAAATTGAGATCCACCTCAAGCGGAAGTCCCA
GGGCCTGATTGATGCTGTTGGATGCTTGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGTGGAATGCTTTAAATGGGGCTTAATGGGTCAT
CCTAGTAGGAATATGGAAGACTTTGTTGCTGGGAGTAATTTGAACTGTGT
TGACCTGGCCCAAGAGATTTCAAAGGAGAAGAATTTCAGTATGTGGCATA
AAGACTGTTTTTGTGGTATTTTGGTGAAGAACGTGGCTACTTTTTACCCT
TGTCTGAAAAGTCTGCCTGAGGCTAAGGTGAAGAGACTTGGATTAATTGC
ATTGATTGCATTGACAAAGGAAGTTTCAAAAAAGCCCAGCAGAGACTTTG
TTCTCTGGTTAAGTCTCACAAAGAGAAGTTTGAACAAGCATAGCAAGCTT
AGAAAGGCAAAATATAAAATATATGGTTCGAGTATTAAAGGCATACCAGG
AAGTGAAATGGAGCAAAATCCTGTGTTCTAGGAAATAACAGATTAAGGGA
GTGGGACCTTGGGGCAAGACCCTACCCAGCTGAATTTAGAACCAGGCATG
TTGGTACACACCTTTAACCCCATGAGACAGGCATGCTGATCTCTGCATTC
AAGGTCAATCTACAGAGCAAGAACCAGGATAGCCAAGCTATGTGAAGGAT
TTAGAAAACATAAAGCCAGTGATAATGTAATAGTACAAGCGGATCATGTT
CTAGATCCTGTAAGCAGCAGAACTTGGCAGCTTCAG

Query= MSMg01no526_c04.b1 MSMg01no526_c04.b1 CHROMAT_FILE:
MSMg01no526_c04.b1 PHD_FILE: MSMg01no526_c04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:58 2005
         (555 letters)



>mm_chr6_104440340_104441293
          Length = 954

 Score = 1035 bits (535), Expect = 0.0
 Identities = 547/551 (99%), Gaps = 1/551 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccacctcttgaaaaaaaaattatgtgctataaaatgacttttttctcatatatcc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacctcttgaaaaaaaaattatgtgctataaaatgacttttttctcatatatcc 264

                                                                       
Query: 65  ataacaaagataagttaaaattttgttttcatgcctacaaagttaaagtttaaggtaata 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataacaaagataagttaaaattttgttttcatgcctacaaagttaaagtttaaggtaata 324

                                                                       
Query: 125 tttagactttattttaagataatatattgcaataaacctttcctcaaattggtcctacca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttagactttattttaagataatatattgcaataaacctttcctcaaattggtcctacca 384

                                                                       
Query: 185 tcagttggagaaaaaaaaattatgtattaagaaagatcaatcatagtagtataaaatggt 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagttggagaaaaaaaa-ttatgtattaagaaagatcaatcatagtagtataaaatggt 443

                                                                       
Query: 245 ggtgagcacacagactcccaacacttgagagactagagttagaggctagactgtcatcat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtgagcacacagactcccaacacttgagagactagagttagaggctagactgtcatcat 503

                                                                       
Query: 305 gaaaccctgtgttaactaaaaagtaaaataaaaccaacaacaaccaaaaagaatcatctt 364
           ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaaccccgtgttaactaaaaaataaaataaaaccaacaacaaccaaaaagaatcatctt 563

                                                                       
Query: 365 cgctatgaacctcttggtgatagagtttacctatatggacagatgagttgctggatagac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cgctatgaacctcttggtgatagagtttacctatatggacagatgagttgctggatagac 623

                                                                       
Query: 425 taagtcaaagagaaatgcagtccatgggcgtcagaacatccagttgtacagaccttgctt 484
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 624 taagtcaaagagaaatgcagtccatgggtgtcagaacatccagttgtacagaccttgctt 683

                                                                       
Query: 485 aacagacaaatccaagtcaggttaaaattggagggatggtgttggacccatagtcaaaag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aacagacaaatccaagtcaggttaaaattggagggatggtgttggacccatagtcaaaag 743

                      
Query: 545 ctctgacccag 555
           |||||||||||
Sbjct: 744 ctctgacccag 754


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space:   514480
Effective search space used:   514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)