Query= MSMg01no528_i07.b1 MSMg01no528_i07.b1 CHROMAT_FILE:
MSMg01no528_i07.b1 PHD_FILE: MSMg01no528_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:08 2005
(684 letters)
>mm_chr6_97428836_97429919
Length = 1084
Score = 1274 bits (659), Expect = 0.0
Identities = 674/679 (99%)
Strand = Plus / Plus
Query: 5 gaattcagcatcctcctgaccatgtggacttcaccctttacttccttcctgctgaccctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcatcctcctgaccatgtggacttcaccctttacttccttcctgctgaccctg 264
Query: 65 atttaggtccggcctccgtccagcacctgctgggaggtatttgtagatgatggtatgatg 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttaggtccggccaccgtccagcacctgctgggaggtatttgtagatgatggtatgatg 324
Query: 125 tattgccaggccaatcctccacagctgccgagagcattgtgacctgacagcttcagcccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattgccaggccaatcctccacagctgccgagagcattgtgacctgacagcttcagcccc 384
Query: 185 cgcccttcctttaaagagcgctgcctctttcaaggtctgcctagcatttcaagggccacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgcccttcctttaaagagcgctgcctctttcaaggtctgcctagcatttcaagggccacc 444
Query: 245 atggggctcaagagaaaagccagtgtttctggtccagctagggagaactctaggcttcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atggggctcaagagaaaagccagtgtttctggtccagctagggagaactctaggcttcag 504
Query: 305 agtgacccgtgaggtcacttgtggctttagtaaccgtgaactgtaactaaacttctctct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtgacccgtgaggtcacttgtggctttagtaaccgtgaactgtaactaaacttctctct 564
Query: 365 ttgcttagctctgctcacttcctagtctcttacactgggaacgatcctcacaggtctgct 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 565 ttgcttagctctgctcacttcctagtttcttacactgggaacgatcctcacaggtctgct 624
Query: 425 aataaccttcctgcttattaaccccagttcactctgattgctaagcaacacactctgcac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aataaccttcctgcttattaaccccagttcactctgattgctaagcaacacactctgcac 684
Query: 485 cagcgtttacgctgcggcctggctcccgtgtgtggtgagttgggtctgttaccggcctcg 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tagcgtttacgctgcggcctggctcccgtgtgtggtgagttgggtctgttaccggcctcg 744
Query: 545 ttctcaccagtgatctgtgagaagctccttggaggccaagtactaaatgaccaacctccc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttctcaccagtgatctgtgagaagctccttggaggccaagtactaaatgaccaacctccc 804
Query: 605 tgccccctcccaaaagcacttcacccttcatccaggtaactggcatgactgtgagaatct 664
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct: 805 tgccccctcccaaaagcacttcaccctccatccaggtaaccggcatgactgtgagaatct 864
Query: 665 gtgaaccgtgtttgccgcc 683
|||||||||||||||||||
Sbjct: 865 gtgaaccgtgtttgccgcc 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 684
Length of database: 1084
Length adjustment: 10
Effective length of query: 674
Effective length of database: 1074
Effective search space: 723876
Effective search space used: 723876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_i07.g1 MSMg01no528_i07.g1 CHROMAT_FILE:
MSMg01no528_i07.g1 PHD_FILE: MSMg01no528_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:08 2005
(289 letters)
>mm_chr6_97592404_97593092
Length = 689
Score = 505 bits (261), Expect = e-147
Identities = 282/289 (97%), Gaps = 2/289 (0%)
Strand = Plus / Minus
Query: 1 atctatcactggagagcatggctggattaactgctcgtattagtaagctttctgttactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atctatcactggagagcatggctggattaactgctcgtattagtaagctttctgttactg 317
Query: 61 tgagaaaatatcttagatcatcaacataaaagtggaaaagtttgccttagctttctttca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 316 tgagaaaatatcttagatcatcaacataaaagtggaaaagtttgccttagctttttttca 257
Query: 121 gaggtctctctcaggcctgtgggaaaatggctcactcaccctaaccgagaagatggggag 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 256 gaggtctctctcaggcctgtgggaaaatggttcactcaccctaaccgagaagatggggag 197
Query: 181 ggaaaggaggaagagagatagaaggggcaaagaagaaaggggggacaagaaagaaggagg 240
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 196 ggaaaggaggaagagagatagaaggggcaaagaagaaaggagggacaagaaagaaggaag 137
Query: 241 aagataagggtgaaggtaggaagggagag-agggaagaagggatagatg 288
|||||||| |||||||||||||||||||| ||| |||||||||||||||
Sbjct: 136 aagataagagtgaaggtaggaagggagaggagg-aagaagggatagatg 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
