Query= MSMg01no528_o12.b1 MSMg01no528_o12.b1 CHROMAT_FILE:
MSMg01no528_o12.b1 PHD_FILE: MSMg01no528_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:39 2005
(638 letters)
>mm_chr6_16742840_16743877
Length = 1038
Score = 1210 bits (626), Expect = 0.0
Identities = 632/634 (99%)
Strand = Plus / Plus
Query: 5 tagatcagctgttctcaacctgtgggctgcaagtgctttggaaagttcaaatgtctcttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tagatcagctgttctcaacctgtgggctgcaagtgctttggaaagttcaaatgtctcttt 264
Query: 65 cacaggggtggaagatcagatatcctgcatatcagatatttacatcacaattcataatag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cacaggggtggaagatcagatatcctgcatatcagatatttacatcacaattcataatag 324
Query: 125 tagaaaattacagatatgaagcagccatgaaataattttctagttgggggtcacgcaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagaaaattacagatatgaagcagccatgaaataattttctagttgggggtcacgcaaat 384
Query: 185 atgaggaattgtattaaaggcttgctgctttaggaaggttgagaaccactgttctcgatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgaggaattgtattaaaggcttgctgctttaggaaggttgagaaccactgttctcgatg 444
Query: 245 caatgttgatctccaggttcaatgagaaacgtaaggtgacacatgatagagcaaaattac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caatgttgatctccaggttcaatgagaaacgtaaggtgacacatgatagagcaaaattac 504
Query: 305 ataaaacataaaatgtgtccctgtcacataaggattgtcactaccaattatgaaaagtta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataaaacataaaatgtgtccctgtcacataaggattgtcactaccaattatgaaaagtta 564
Query: 365 aagcttgcccttttcagtggaaaaatttagaaaaactttttggatatacccattatcttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagcttgcccttttcagtggaaaaatttagaaaaactttttggatatacccattatcttt 624
Query: 425 attgaaatattgatctgaatactatagtcaacacacaaacaaaaataataaaattaaaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attgaaatattgatctgaatactatagtcaacacacaaacaaaaataataaaattaaaaa 684
Query: 485 tcacaaattttatattaagtaccatttaatatcttgaactttataatttctcagttttgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcacaaattttatattaagtaccatttaatatcttgaactttataatttctcagttttgt 744
Query: 545 caatagcataaacacatttcagatacagcagtcgctcagataatttcctggaaaaagcgt 604
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caatagcataaacacgtttcagatacagcagtcgctcagataatttcctggaaaaagcgt 804
Query: 605 gttttccaggctcgttctaggcatggctgttgtg 638
| ||||||||||||||||||||||||||||||||
Sbjct: 805 gctttccaggctcgttctaggcatggctgttgtg 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_o12.g1 MSMg01no528_o12.g1 CHROMAT_FILE:
MSMg01no528_o12.g1 PHD_FILE: MSMg01no528_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:39 2005
(672 letters)
>mm_chr6_16915306_16916377
Length = 1072
Score = 1274 bits (659), Expect = 0.0
Identities = 670/675 (99%), Gaps = 3/675 (0%)
Strand = Plus / Minus
Query: 1 attattatcctcacatcc---ttatgaaaaagagtccttctttttaagcactgattaagc 57
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 attattatcctcacatccttattatgaaaaagagtccttctttttaagcactgattaagc 993
Query: 58 aagtactctgaaatggctttatgttaagcactttacatgcattattaaaattgttcggga 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 aagtactctgaaatggctttatgttaagcactttacatgcattattaaaattgttcggga 933
Query: 118 ttccggcagagtcccattttatggataatgaactgaggcccagagatattaagtacttgc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ttccggcagagtcccattttatggataatgaactgaggcccagagatattaagtacttgc 873
Query: 178 atgactaacaaaaagcatcactattccatgtccatgcaatgatgattgagcagaatcact 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 atgactaacaaaaagcatcactattccatgtccatgcaatgatgattgagcagaatcact 813
Query: 238 ctgccttgtttggtcttaccgctttttcactggctttattagcgaggtctgcaatggttt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 ctgccttgtttggtcttaccgctttttcactggctttattagcgaggtctgcaatggttt 753
Query: 298 ataagatacatagactaatctgaagtagattaagccaaagatataatttactggctccta 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ataagatacatagactaatctgaagtagattaagccaaagatataatttactggctccta 693
Query: 358 gaaccaggaaggaaagctgatatagggccatgagtggaaccagaatttcaagtaacttga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaaccaggaaggaaagctgatatagggccatgagtggaaccagaatttcaagtaacttga 633
Query: 418 acgtccctttctcatctctgcttttttctgtatactgcctttgttcttgggccagttcct 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 acgtccctttctcatctctgcttttttctgtatactgcctttgttcttgggccagttcct 573
Query: 478 cttttcagccttcagttcctcgaggttagtgttctcacatcttgcaggaaaaggaaccga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cttttcagccttcagttcctcgaggttagtgttctcacatcttgcaggaaaaggaaccga 513
Query: 538 ggctgtagttagttcagctccattctgaaaagttttaaccaggactttctggggtcacat 597
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 512 ggctgtagttagttcagctccattgtgaaaagttttaaccaggactttctggggtcacat 453
Query: 598 gtctaggccttgacctggtcgttgggaccaagatggtaagtgctacggtcatagtggggg 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtctaggccttgacctggtcgttgggaccaagatggtaagtgctacggtcatagtggggg 393
Query: 658 agaggggacctactg 672
| |||||||||||||
Sbjct: 392 aaaggggacctactg 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
