Query= MSMg01no529_f24.b1 MSMg01no529_f24.b1 CHROMAT_FILE:
MSMg01no529_f24.b1 PHD_FILE: MSMg01no529_f24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:18 2005
(654 letters)
>mm_chr6_117282129_117283183
Length = 1055
Score = 1164 bits (602), Expect = 0.0
Identities = 632/642 (98%), Gaps = 3/642 (0%)
Strand = Plus / Plus
Query: 15 ggaattc-ccacaacacttttgcacctgtacatgca-tactttatagtcactgtcacctc 72
||||||| |||||||||||||||||||||||| | | |||||||||||||||||||||||
Sbjct: 215 ggaattcaccacaacacttttgcacctgtacacg-agtactttatagtcactgtcacctc 273
Query: 73 taggaactttcactcagatctcccaaagtgaacaaatgaagtcacctgagatgtctccaa 132
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 274 taggaactttcactcagatctcccaaagtgaacaaatgaagtcacctaagatgtctccaa 333
Query: 133 actattcacggagtagctgaaaagatggagagggggaggaaaggatttgcagtgcaatct 192
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 334 accattcacggagtagctgaaaagatggagagggggaggaaaagatttgcagtgcaatct 393
Query: 193 tctaagttgttagtataagttgcaaataaaatgtgaggggagtttatctcctttgcaggg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tctaagttgttagtataagttgcaaataaaatgtgaggggagtttatctcctttgcaggg 453
Query: 253 aaaccagggttgccaaccccaaactgttatgaactccaagacaaccctctgctgtatctg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aaaccagggttgccaaccccaaactgttatgaactccaagacaaccctctgctgtatctg 513
Query: 313 gcctgtaaatcattgaactttagacctatgtgaaattccatctcacacgtttttaatgaa 372
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gcctgtaaatcattgaacttcagacctatgtgaaattccatctcacacgtttttaatgaa 573
Query: 373 gtcaaaataaatgccattactgaacagaagccaaagatcacaagaggttagaagtgggac 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gtcaaaataaatgccattactgaacagaagccaaagatcacaagaggttagaagtgggac 633
Query: 433 aggaacgccgccaacgctgtttgtttgccttctgatgcagccttcgtgtgaacagttcct 492
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 634 aggaacgccgccaacgctgtttgtttgccttctgaagcagccttcgtgtgaacagttcct 693
Query: 493 taatgggagggcagggatggtcctcccttccctgtgggcatctgctgctgattatacagc 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 taatgggagggcagggatggtcctcccttccctgtgggcatctgctgctgattatacagc 753
Query: 553 agtcagagtggctgtgtggtgcctaggaaacttgagacgataatgaggactcaggcaagc 612
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 754 agtcagagtggctgtgtggtgcctaggaaacttgagacaataatgaggactcaggcaagc 813
Query: 613 agaatgtgagagactgaaaccacaagatgcagacatccctgg 654
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 agaatgtgagagactgaaaccacaagatgcagacatccctgg 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_f24.g1 MSMg01no529_f24.g1 CHROMAT_FILE:
MSMg01no529_f24.g1 PHD_FILE: MSMg01no529_f24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:18 2005
(644 letters)
>mm_chr6_117416095_117417138
Length = 1044
Score = 1199 bits (620), Expect = 0.0
Identities = 638/644 (99%)
Strand = Plus / Minus
Query: 1 cccttcgtgaggtcctccagggatgacatcatgcacattctgcattgtggttcactttca 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 cccttcttgaggtcctccagggatgacatcatgcacattctgcattgtggttcactttca 785
Query: 61 gtgcacaaatgccaactgtatgcacaggaaaccgaggaaggaaagtgaatgtgagaatac 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 784 gtgcacaaatgccaactgtatgcacaggaaaccgaggaaggaaagtgaacgtgagaatac 725
Query: 121 aatagctgtctttaaaaattactcatattttaaacaaaagtatagcaggctgtttcaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 aatagctgtctttaaaaattactcatattttaaacaaaagtatagcaggctgtttcaaat 665
Query: 181 ttctgcttattaggaaagtgccttgaagcatccttgatagacttgtgacagggctgggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ttctgcttattaggaaagtgccttgaagcatccttgatagacttgtgacagggctgggat 605
Query: 241 gctgttggtgcctgtggggcaggggacatttgctgaaatgagccccttaaagcaccgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 604 gctgttggtgcctgtggggcaggggacatttgctgaaatgagccccttaaagcactgtct 545
Query: 301 acacagggaagtgaagaagaccgctgtggtggttgaggtgatgtctccttggataataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acacagggaagtgaagaagaccgctgtggtggttgaggtgatgtctccttggataataat 485
Query: 361 gtcaacctaggctgtcactgaacttggatgggtgggtttagaaagtgggagaaccttgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtcaacctaggctgtcactgaacttggatgggtgggtttagaaagtgggagaaccttgcc 425
Query: 421 taggtcccatgtcttctaaacaccgcagcaaggagaggggaaagacatgagtagggggcc 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 424 taggtcccatgtcttctaaacactgcagcaaggagaggggaaagacatgagtagggggcc 365
Query: 481 tgggtcaaagtattcagttgtccctatattgacctcgccaagatgggcttcacgcaaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgggtcaaagtattcagttgtccctatattgacctcgccaagatgggcttcacgcaaaca 305
Query: 541 tgtttgaccaagagtccatcccaatagggaaacttgggaaggtaaaaggaaaacagcggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 304 tgtttgaccaagagtccatcccaatagggaaacttgggaaggtaaaaggaaaacaacggt 245
Query: 601 cacatgggaaaagtatttgggtttgcagatgtaatgaatcaaca 644
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 244 cacatgggaaaagtatttgggtttgcagatgtaatgaatgaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
