Query= MSMg01no529_g11.b1 MSMg01no529_g11.b1 CHROMAT_FILE:
MSMg01no529_g11.b1 PHD_FILE: MSMg01no529_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:21 2005
(671 letters)
>mm_chr6_23516074_23517144
Length = 1071
Score = 1266 bits (655), Expect = 0.0
Identities = 667/671 (99%)
Strand = Plus / Plus
Query: 1 atgctactgaaaagtatagcacactagtttatcctatgcctggctgagtttgttttctta 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgctactgaagagtatagcacactagtttatcctatgcctggctgagtttgttttctta 260
Query: 61 tgccatccaggaccaccactcaagagtgccaaccactcacatgggcaggctctccacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccatccaggaccaccactcaagagtgccaaccactcacatgggcaggctctccacacc 320
Query: 121 aatcactaattaagaaaatgccccacaaccttgaatataggccagtctggtggtcaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcactaattaagaaaatgccccacaaccttgaatataggccagtctggtggtcaccat 380
Query: 181 tatttccctagctgagtctcccttttctcaaatgtctctagcttgtcatgttgaggaaac 240
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 381 tatttccctagctgagtctcccttttctcaaatgtctctagtttatcatgttgaggaaac 440
Query: 241 aaaacaatcccctcccccaacagccagaacaggtataatatgtaaatgacacattatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaacaatcccctcccccaacagccagaacaggtataatatgtaaatgacacattatctc 500
Query: 301 acaaaactccatttgtgccctttgattacaaaaattgtatgtgtttacagagctgaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaaactccatttgtgccctttgattacaaaaattgtatgtgtttacagagctgaaatt 560
Query: 361 tagtagtctggttggaggttgatctattctggaagtagaatcttcttcctcctagatagg 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tagtagtctggttggaggttgatctattctggaagtacaatcttcttcctcctagatagg 620
Query: 421 agagttttagctattgatttgttagtccttgtttccataaactaaactgaaaagtaagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agagttttagctattgatttgttagtccttgtttccataaactaaactgaaaagtaagca 680
Query: 481 agagatgtgggtggaaacttttaagtgcagaaaaacacagttgtatgtttggttaaataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agagatgtgggtggaaacttttaagtgcagaaaaacacagttgtatgtttggttaaataa 740
Query: 541 aatagtcaacctgtgcttcaaagatgtccgtattgggcaacataacctattaagatgata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatagtcaacctgtgcttcaaagatgtccgtattgggcaacataacctattaagatgata 800
Query: 601 tgataatagctttagcttttataggattctatcttacatttaggaagtgttttctgccat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgataatagctttagcttttataggattctatcttacatttaggaagtgttttctgccat 860
Query: 661 gtgaattacag 671
|||||||||||
Sbjct: 861 gtgaattacag 871
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_g11.g1 MSMg01no529_g11.g1 CHROMAT_FILE:
MSMg01no529_g11.g1 PHD_FILE: MSMg01no529_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:21 2005
(617 letters)
>mm_chr6_23694420_23695436
Length = 1017
Score = 1054 bits (545), Expect = 0.0
Identities = 562/568 (98%), Gaps = 2/568 (0%)
Strand = Plus / Minus
Query: 1 agcagagtactaagagtactaagcaggattcccaataattaatatcatccatgtataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 agcagagtactaagagtactaagcaggattcccaataattaatatcatccatgtataaaa 708
Query: 61 tggaagtcttggttacttcttgatttttgtcttggaagatcaagcacaaaaataaaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tggaagtcttggttacttcttgatttttgtcttggaagatcaagcacaaaaataaaatca 648
Query: 121 cagagtaaactgtggactgaagattaaaagaaagtggacccttggagaacttttctctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 cagagtaaactgtggactgaagattaaaagaaagtggacccttggagaacttttctctga 588
Query: 181 gacataaaatggaaataattggagtagggagaaggaagacaaatacaaaggggataatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gacataaaatggaaataattggagtagggagaaggaagacaaatacaaaggggataatta 528
Query: 241 tgtaacacacaaaagtgttcctgacctgagctagacaaagacctgggcttgcaaattgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tgtaacacacaaaagtgttcctgacctgagctagacaaagacctgggcttgcaaattgga 468
Query: 301 agtctaagcaatgtctaagatcactgaacttgaaaagatccacgtctagacatcctgtac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agtctaagcaatgtctaagatcactgaacttgaaaagatccacgtctagacatcctgtac 408
Query: 361 aatttccaagctctctaatgacttagcagatttcaggtgaaaaactacaaattattttaa 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 407 aatttccaagctctctaatgacttagcagatttcaggt-aaaaactacaaattattttaa 349
Query: 421 gagacagttgactgtggtaaccagcttttctttggcttttccctttgcaagtcaggaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 348 gagacagttgactgtggtaaccagcttttctttggcttttccctttgcaagtcgggaaaa 289
Query: 481 gagatggtgtacagaagagagcaaggaatgaggagtgtgtaatgcangagggaggggaag 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 288 gagatggtgtacagaagagagcaaggaatgaggagtgtgtaatgcaggagggaggggaag 229
Query: 541 aa-ggaggagtgtgtaacgcaggaggga 567
|| |||||||||||||| | ||||||||
Sbjct: 228 aaaggaggagtgtgtaatgtaggaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
