NACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTACAACCGATTCTTGGATGAGGCACATTTCTGCTAACTTGAGA
GTCACAAGTCAGGGGTGCAAGCCCACGTCCTCTGGGTTGGAAATACAGGT
CTTGTTAAGATTTCCAGATTTCCAGAGACTTGGCATCACTCTTTGGTGCA
CAGAGCTTTCTAGGTGTGGATGTTTTCTGATCAATAGTTTGTTTCAATAG
CTTGATCGATGGCTGTGTTTCAAGGTTTCCTCCCTTAAGTTCCTCTCCCA
TCCTGTTTTTCTAGACTTCGCTCTCTTCTCTCAGTGCTAACTACCTTTGA
CATGTCACAATGTGTTGGAAGACTTAAGTCATGATTTGATTGGCTTGTCT
TCCCTGTTATCTGTAATAAAGTTCTTCAGAAAGGCAGTTTGCAGGTTGTG
AATGGTTGTATTATTTCACCTCATTGCAAAATAGACCTGTGAATATCTCT
TTGCTATTGAATATTCTTTATTGGAAGCAGCCTCTGATATTTCTAGGACT
GGACTGTTCTAGGTCACTTGGATTTCAATATTCATTTTGTGATCTTTTTT
GAGGTGTGTATTGTTTGGTAACCTAGTTCCTGCTAGTAAAAAAGAACAGA
TCTTTGCTTTGTCCCCACACCCACCTCCTTTTCTGTGTCACAGAGCCTTT
GTTAATAGCAGATTTGTCTGCCCCCCTTCGTTTACTGTCACACTTATTAC
AATAC

ACCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGTACCCCATTTTTA
ATAGGGTTATTTGGTTTTCTGGAGTCTAACTTCTTGAGTTCTTTGTATAT
AGTGGACATTAGCCCTCTACCGGATTTAGAACTGTTAAAGATCTTTTCCC
AATCTGTTGGTTGCCTTTTTGTGTTTTTGACAGTGTCCTTTGTCTTACAG
AAATTTTGCAATTTTATGAGGTCCTATTTGTTAATTCTTGGTCTTACAGT
ACAAGCCATTGGTGTTGTGTTCAGGAATTTTTCCCCTGTGCCCATATCTT
TGTGACTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTT
ATATGGAGGTCAAAAATCCACCAGTGAACTCCTAAACCTGATAAACAACT
TCAGTGAAGTAGCTAGATATAAAATTAAACAAATCAGTAACCTTTCTCTA
CACAAAGGATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCA
CAATAGTCACAAATAACATAAAATACCTGGGTGTGACTCTAACTAAGGAA
GTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTGAAGAAAGAAATTGA
GGAAGATCTCAGAAAATGGAAAGATCTCCCATGCTCATGGATTGGCAGGA
TTAATATAGTAAAAATGGCTATCTTGCCAAAGCAATCCACAGATTTCATG
GCATCCCCATCA

Query= MSMg01no529_j23.b1 MSMg01no529_j23.b1 CHROMAT_FILE:
MSMg01no529_j23.b1 PHD_FILE: MSMg01no529_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:40 2005
         (630 letters)



>mm_chr6_97007899_97008928
          Length = 1030

 Score = 1083 bits (560), Expect = 0.0
 Identities = 621/664 (93%), Gaps = 38/664 (5%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctacaaccgattcttggatgaggcacatttctgctaacttgagagtcacaagtca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 gaattctacaaccgattcttggatgaggcacatttctgctaacttgagagtcacaagtca 929

                                                                       
Query: 65  ggggtgcaagcccacgtcctctgggttggaaatacaggtcttgttaagatttcca----- 119
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 928 ggggtgcaagcccacgtcctctgggttggaaatacaggtcttgttaagatttccagggtc 869

                                                                       
Query: 120 ---------gat----------------t-----t---ccagagacttggcatcactctt 146
                    |||                |     |   ||||||| ||||||||||||||
Sbjct: 868 tctccaactgatggtgactaatgtcctctccaaatgacccagagatttggcatcactctt 809

                                                                       
Query: 147 tggtgcacagagctttctaggtgtggatgttttctgatcaatagtttgtttcaatagctt 206
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 808 tggtgcacagagctttctaggtgtggatgctttctgatcaatagtttgtttcaatagctt 749

                                                                       
Query: 207 gatcgatggctgtgtttcaaggtttcctcccttaagttcctctcccatcctgtttttcta 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gatcgatggctgtgtttcaaggtttcctcccttaagttcctctcccatcctgtttttcta 689

                                                                       
Query: 267 gacttcgctctcttctctcagtgctaactacctttgacatgtcacaatgtgttggaagac 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gacttcgctctcttctctcagtgctaactacctttgacatgtcacaatgtgttggaagac 629

                                                                       
Query: 327 ttaagtcatgatttgattggcttgtcttccctgttatctgtaataaagttcttcagaaag 386
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 628 ttaagtcatgatttgattggcttgttttccctgttatctgtaataaagttcttcagaaag 569

                                                                       
Query: 387 gcagtttgcaggttgtgaatggttgtattatttcacctcattgcaaaatagacctgtgaa 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gcagtttgcaggttgtgaatggttgtattatttcacctcattgcaaaatagacctgtgaa 509

                                                                       
Query: 447 tatctctttgctattgaatattctttattggaagcagcctctgatatttctaggactgga 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tatctctttgctattgaatattctttattggaagcagcctctgatatttctaggactgga 449

                                                                       
Query: 507 ctgttctaggtcacttggatttcaatattcattttgtgatcttttttgaggtgtgtattg 566
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 448 ctgttctaggtcacttggatttcaatattcattttgtgatcttttttgaggcgtgtattg 389

                                                                       
Query: 567 tttggtaacctagttcctgctagtaaaaaagaacagatctttgctttgtccccacaccca 626
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tttgataacctagttcctgctagtaaaaaagaacagatctttgctttgtccccacaccca 329

               
Query: 627 cctc 630
           ||||
Sbjct: 328 cctc 325


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space:   632400
Effective search space used:   632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)