AATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATTCACTTGTTCCTAGAAACCATCAAATTCCATGGTCTTTCATT
CTCCGGCTACAGAATATGGAATGACAGTTGTAGCATTCAGTCTGCATCTG
AAGGCTCAAAAATCGAAGTTGGCATTACGGTAGCTGTATAAATTCAGGTT
TAAGCTGAAACCCAGAGAACCAGAAGGATAGATCTTCAGCAGAGGATGTA
CATTCTCTCTTCCTTTTACCCTTTTGTTAGTCTGGATGTGCCTGCCTATC
TTGTGTGAGAACAACCTTATATACTGATTACTGTGTTGATCCCACTCACA
GACACACCCAGAAATCATGTTCTTACAGTAATATTCTCGCATATAGGATC
AAGTAGATGAGTCCCACTCAGCCAGAATTCCTTTCCCAGGTAATACTTGC
TCTATAAATTACTGTCCAAGGAATTTCAGTAAGGGAAAAGCACTGGGGGA
GTGCCATGGACCAGCCTCAGTCAGTCCTAATTGCCTCTTATGCCCTAATT
TCTCAATCCATGGGAGAAATTAGGGTTCTGGACAGGTGGAAAAGGAGTTG
ACAAAAAAGGTGACAAACACACAAGGGAGTGCTATATCTGGATGCTATTT
GTCTCAAAGCGAGCACCAGTCTTATAAGTGACTTTTTCACAAAACAGAAG
AATGCATACAAAAAGCTAAAGGAACCAACTGGGATAAAAATCAATGTTAA
CAACTGG

TTTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCTTCCAGTTAAGGAGAAT
TGTGGGAAGCCGCCCCCACATTCGCTGTTACAAGATGGCGCTGACAGCTG
TGTTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCAAAGGTAGTCCTC
CACCCCATGTGCCCTGCCTTCCCCGTGACGACAACTCGGCCATGGGCTGC
AGCCAATTAGGGAGTGATACGTCCTAGGCGAAGGATAACTCTCCTAAATA
GGGACGGGGTTTCGCTTTTGGTTTTGGGGGTTTTGCACTCTTGCTCCTGA
AGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCT
TTCCTGGCCGGTCGCGAAAGCGTGTAAGAGTTGGTGCCGGACCCGGGAAA
AAAGAACCCGGGACGAAAAAACCCGGGACAAGAAAACTCGGGACGGGAGT
TAACCATCACCGGCGCAAGGAAGATCCCTCATTCCGGAACCAGAACTGCG
GGTCATGGTAATGAAGTGTTCCCGTAAAACAGACTGTTGAGAAGGATCCG
GTGTGGATTCAGAACTCCTCAGCTGGGGAACGGTGGTAATAAAGTGTTCC
CGTAAAACAGACTGTTGAGAAGGATTCAACTGCGTGAATTCAAAACTCTT
CAGCTGGGGAATGGTGGTAATGAAGTGTTCCCGTAAAACAGACTGTTGAG
AN

Query= MSMg01no530_i16.b1 MSMg01no530_i16.b1 CHROMAT_FILE:
MSMg01no530_i16.b1 PHD_FILE: MSMg01no530_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:54 2005
         (697 letters)



>mm_chr6_107411302_107412398
          Length = 1097

 Score = 1276 bits (660), Expect = 0.0
 Identities = 686/696 (98%), Gaps = 4/696 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcattcacttgttcc--tagaaaccatcaaattccatggtctttcattctccggc 61
           ||||||||||||||||   |  ||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ggaattcattcacttg--gcaatagaaaccatcaaattccatggtctttcattctccggc 775

                                                                       
Query: 62  tacagaatatggaatgacagttgtagcattcagtctgcatctgaaggctcaaaaatcgaa 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 tacagaatatggaatgacagttgtagcattcagtctgcatctgaaggctcaaaaatcgaa 715

                                                                       
Query: 122 gttggcattacggtagctgtataaattcaggtttaagctgaaacccagagaaccagaagg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gttggcattacggtagctgtataaattcaggtttaagctgaaacccagagaaccagaagg 655

                                                                       
Query: 182 atagatcttcagcagaggatgtacattctctcttccttttacccttttgttagtctggat 241
           |||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 654 atagatcttcagcaaaggatgtacattctctcttatttttacccttttgttagtctggat 595

                                                                       
Query: 242 gtgcctgcctatcttgtgtgagaacaaccttatatactgattactgtgttgatcccactc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gtgcctgcctatcttgtgtgagaacaaccttatatactgattactgtgttgatcccactc 535

                                                                       
Query: 302 acagacacacccagaaatcatgttcttacagtaatattctcgcatataggatcaagtaga 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 acagacacacccagaaatcatgttcttacagtaatattctcgcatataggatcaagtaga 475

                                                                       
Query: 362 tgagtcccactcagccagaattcctttcccaggtaatacttgctctataaattactgtcc 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tgagtcccactcagccagaattcctttcccaggtaatacttgctctataaattactgtcc 415

                                                                       
Query: 422 aaggaatttcagtaagggaaaagcactgggggagtgccatggaccagcctcagtcagtcc 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aaggaatttcagtaagggaaaagcactgggggagtgccatggaccagcctcagtcagtcc 355

                                                                       
Query: 482 taattgcctcttatgccctaatttctcaatccatgggagaaattagggttctggacaggt 541
           |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 354 taattgcctcttatgccctaatttttcaatccacgggagaaattagggttctggacaggt 295

                                                                       
Query: 542 ggaaaaggagttgacaaaaaaggtgacaaacacacaagggagtgctatatctggatgcta 601
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ggaaaaggagttgacaaaaaaggtgacaaacacacaagggagtgctatatctggatgcta 235

                                                                       
Query: 602 tttgtctcaaagcgagcaccagtcttataagtgactttttcacaaaacagaagaatgcat 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tttgtctcaaagcgagcaccagtcttataagtgactttttcacaaaacagaagaatgcat 175

                                               
Query: 662 acaaaaagctaaaggaaccaactgggataaaaatca 697
           ||||||||||||||||||||||||||||||||||||
Sbjct: 174 acaaaaagctaaaggaaccaactgggataaaaatca 139


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space:   746769
Effective search space used:   746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)