AACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGC
GGAATTCAGTATCTTATGCAAAAATAAGAGCAGACCTTGGGCACGAACTC
TGCAGCTAGCCCCACAACATCCAGAGGCAGCTCCACTCCCAGGTGCTACA
ATACACCCAGGATCACAGGATCCCGGGATCCCAGGAGCTTGGTCACACCA
GGATCTCAAGGCCCCAAAGGCAGCTTGACTCCCAGGAGCTCAGACACACT
CAGGATCTCAGGATCGCAAAATCCCAGAGTCACAGGATCACAGAGACAGC
TTGACTTGGAGGAGTTCTGACACAGCCAGGATCACAGGAAGGACAGGCTC
CAGTCAGACATAGCCAGGCAGGTAGTTCTAGAGATAACCGAATGTCGGGA
GGCAAGCAAACACAAGCAACAGGAACCAAGGTTACTTAGCATCACCAGAA
CCCAATTCTCCCACTATAGCCAGTCCTGAATACCCCAAACACACTGGGAA
AGCAAGTTTCAGATCTAAAATCACTTCTCATGATCATGATAGAGGACATT
AAGAAGGACATAAATAACTCCCTTAAAGAAATACAGGAAAACACAGGTAA
ACAGCTAGAAGCCTTTAAAGAGAAAACGCAAAAATTCCTTAAAGAGTTAC
AGGAAAACACAATCAAACAGGCAAAGGAAAGGAACAAAACCATCCAGGAT
CTAAAAATGGAAATAGAAACAATGAAGATATCACAAAGGGAGACAACCTT
TGGAGTTA

NCACCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCACTATGTAGCCCAGGCTGCTC
TTGAACTTGGAATTCTCCTGCCTCAGCCTCCTGGGTGTTAGAATTATGAT
TTCTGACAGGATGAGACACTGATAAAGGAAAATACACATTGGAAATGCTT
CTCTTTTCAAGGACTGATGGGCAGCTACGCAGCAGTGTTGGGGGGCTACA
GTCATATGACACAATAGTGTATGTCCTAGGGTTTTACTCCTGTGAAGAGA
CACCATGACCAAGGCAACTCTTATAAGGACAACATTTAATTGGGGCTGGC
TTACAGGCTTAGAGGTCCAGTCCATTATCATCAAGGTGGGAGCGTGGCAG
TGTCCAGACAGGCATGGTGTAGGAGGAGTTGAGAGTTCAGCATCTTCATC
TGAAGGCTGCTAGAAAGTATTCTTCCAGGCAGCTAGAATGAGGGTCTTAA
AGCCCACACCCACAGTGACACACCTACTTCAACAAGGCCACACCTTCTAA
TTGTGCCACTCCCTGGGCTAAGCATATACAAACCATCACAGGGTGTAAGG
AGATAATTGTTAGAGTCTCCTGAAAATAGACATCTTTTGAGCAGATGTTC
GTTTATGACATGTATATGTGAGTCAATAGCTGTGTGGCTCCCACCCTCTA
GAATCTACTACAGCACACCTCCTGGGCCCCACACTGCTGCGTGTATCTGG
TTTGCATGCAGGCCC

Query= MSMg01no530_k12.g1 MSMg01no530_k12.g1 CHROMAT_FILE:
MSMg01no530_k12.g1 PHD_FILE: MSMg01no530_k12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:03 2005
         (683 letters)



>mm_chr6_72965189_72966271
          Length = 1083

 Score = 1290 bits (667), Expect = 0.0
 Identities = 679/683 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cactatgtagcccaggctgctcttgaacttggaattctcctgcctcagcctcctgggtgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 cactatgtagcccaggctgctcttgaacttggaattctcctgcctcagcctcctgagtgt 260

                                                                       
Query: 61  tagaattatgatttctgacaggatgagacactgataaaggaaaatacacattggaaatgc 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagaattatgatttctggcaggatgagacactgataaaggaaaatacacattggaaatgc 320

                                                                       
Query: 121 ttctcttttcaaggactgatgggcagctacgcagcagtgttggggggctacagtcatatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctcttttcaaggactgatgggcagctacgcagcagtgttggggggctacagtcatatg 380

                                                                       
Query: 181 acacaatagtgtatgtcctagggttttactcctgtgaagagacaccatgaccaaggcaac 240
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 acacaatagtgtatgtcctagggttttactgctgtgaagagacaccatgaccaaggcaac 440

                                                                       
Query: 241 tcttataaggacaacatttaattggggctggcttacaggcttagaggtccagtccattat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttataaggacaacatttaattggggctggcttacaggcttagaggtccagtccattat 500

                                                                       
Query: 301 catcaaggtgggagcgtggcagtgtccagacaggcatggtgtaggaggagttgagagttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catcaaggtgggagcgtggcagtgtccagacaggcatggtgtaggaggagttgagagttc 560

                                                                       
Query: 361 agcatcttcatctgaaggctgctagaaagtattcttccaggcagctagaatgagggtctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcatcttcatctgaaggctgctagaaagtattcttccaggcagctagaatgagggtctt 620

                                                                       
Query: 421 aaagcccacacccacagtgacacacctacttcaacaaggccacaccttctaattgtgcca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaagcccacacccacagtgacacacctacttcaacaaggccacaccttctaattgtgcca 680

                                                                       
Query: 481 ctccctgggctaagcatatacaaaccatcacagggtgtaaggagataattgttagagtct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctccctgggctaagcatatacaaaccatcacagggtgtaaggagataattgttagagtct 740

                                                                       
Query: 541 cctgaaaatagacatcttttgagcagatgttcgtttatgacatgtatatgtgagtcaata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cctgaaaatagacatcttttgagcagatgttcgtttatgacatgtatatgtgagtcaata 800

                                                                       
Query: 601 gctgtgtggctcccaccctctagaatctactacagcacacctcctgggccccacactgct 660
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gctgtgtggctcccaccctctggaatctactacagcacacctcctgggccccacactgct 860

                                  
Query: 661 gcgtgtatctggtttgcatgcag 683
           |||||||||||||||||||||||
Sbjct: 861 gcgtgtatctggtttgcatgcag 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)