NNNNAATCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTTTCCTCTGAGCCCCACTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGCTGGTG
GTCTTTTTGTCTTATTAATGGTGTCTTTTGCCTTGGAGAAACTTTGGAGT
TTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGC
TGCTCTGTTCAGGAATTTTTCCCCTGAGCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
CTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGTATGGATCAAT
TCGCATTCTTCTACAGGAAAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTATCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATC
TAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTTTATTTCA
TTGGTCTACTTGTCTGTTTCTATACCAGTACCATGCAGTTTTTATCACAA
TTGCTCTGTAGTAAAGCTTTAGGTCAGGTATGATGATTCCACCAGAGGTT
CTTTTATCCTTGAGAAGAGTTTTTGCTACCCTAGGTTTTN

NCGTTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGTAGATGTAGGAATCTGTT
TAGGAATTCTTGATGTATATGCATTTTCATGTTGTGTTATGCCTGCAGCA
TGATGTGAGAAAACTAAGTGTTCCTGGGCTTGCTTTATTTCCTTTCTTTG
TACATGTTTTCATGAGGTTATTGATTTGTGAATAGTAAAGTTAGGGGTGT
TTTTAATGTGACCTTATAATTCTAGCAATATTGGACGTATGTCTTTTGTA
AACCAAGTGAGACATATTTTAAAATCTTGACTTTCTCTCTCATTACTTGT
TTGTATGTTTTCAGCTTTGTCTTTATCTGTTTATACACATAAAAACACAA
ACAAACTCATATATATTTATATAATATTAAATATATATGTAATTAGACAT
TTATAAATATATATCTGGATACATAGATATTATATATGTATTTAGAAATG
TGTATATATATACATATACATATATTCAACAGTTAAAGAAAAAAAGCAAA
TTTCAAAAAGAAGAAAGAATAGATGGGAGAGTTTTTAGGAAGGTCTGGCA
GGGGAAAATGATATAGTTAAAATATAATCTCAAACCTTAAAATTTATCTG
GGTTTTGTTCTCCAAGTACCTCAGGGAAGACTTCAGCAGAAGCTAACCTC
TCTACCTGGAATAAAGCTTTTTTAATAAATGTGAAATTGATTTTCC

Query= MSMg01no531_a05.g1 MSMg01no531_a05.g1 CHROMAT_FILE:
MSMg01no531_a05.g1 PHD_FILE: MSMg01no531_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:31 2005
         (595 letters)



>mm_chr6_26593146_26594140
          Length = 995

 Score = 1100 bits (569), Expect = 0.0
 Identities = 586/595 (98%), Gaps = 6/595 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagtagatgtaggaatctgtttaggaattcttgatgtatatgcattttcatgttgtgtta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtagatgtaggaatctgtttaggaattcttgatgtatatgcattttcatgttgtgtta 260

                                                                       
Query: 61  tgcctgcagcatgatgtgagaaaactaagtgttcctgggcttgctttatttcctttcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcctgcagcatgatgtgagaaaactaagtgttcctgggcttgctttatttcctttcttt 320

                                                                       
Query: 121 gtacatgttttcatgaggttattgatttgtgaatagtaaagttaggggtgtttttaatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtacatgttttcatgaggttattgatttgtgaatagtaaagttaggggtgtttttaatgt 380

                                                                       
Query: 181 gaccttataattctagcaatattggacgtatgtcttttgtaaaccaagtgagacatattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaccttataattctagcaatattggacgtatgtcttttgtaaaccaagtgagacatattt 440

                                                                       
Query: 241 taaaatcttgactttctctctcattacttgtttgtatgttttcagctttgtctttatctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaatcttgactttctctctcattacttgtttgtatgttttcagctttgtctttatctg 500

                                                                       
Query: 301 tttatacacataaaaacacaaacaaactcatatatatttatataatattaaatatatatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttatacacataaaaacacaaacaaactcatatatatttatataatattaaatatatatg 560

                                                                       
Query: 361 taattagacatttataaatatatatctggatacatagatattatatatgtatttagaaat 420
            || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 gaaatagacatttataaatatatatctggatatatagatattatatatgtatttagaaat 620

                                                                       
Query: 421 gtgtatatatatacatatacatatattcaacagttaaagaaaaaaagcaaatttcaaaaa 480
           |||||||||||||||||||      |||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgtatatatatacatata------ttcaacagttaaagaaaaaaagcaaatttcaaaaa 674

                                                                       
Query: 481 gaagaaagaatagatgggagagtttttaggaaggtctggcaggggaaaatgatatagtta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gaagaaagaatagatgggagagtttttaggaaggtctggcaggggaaaatgatatagtta 734

                                                                  
Query: 541 aaatataatctcaaaccttaaaatttatctgggttttgttctccaagtacctcag 595
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 aaatataatctcaaaccttaaaatttatctgggttttgttctccaagtacctcag 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)