Query= MSMg01no531_f02.b1 MSMg01no531_f02.b1 CHROMAT_FILE:
MSMg01no531_f02.b1 PHD_FILE: MSMg01no531_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:54 2005
(573 letters)
>mm_chr6_74362279_74363251
Length = 973
Score = 1054 bits (545), Expect = 0.0
Identities = 554/557 (99%)
Strand = Plus / Minus
Query: 1 gaattccatgtttttcaatggggttggggacagtgatttcatttgttattttgtcttttc 60
||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaattccatgtttgtgaatggagttggggacagtgatttcatttgttattttgtcttttc 498
Query: 61 attttttgtttgtttattttgatttattttttgttgtctatttttattcagggtaaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 attttttgtttgtttattttgatttattttttgttgtctatttttattcagggtaaggac 438
Query: 121 aggtgagaaaaataacacaaatttggctgggcttggaactggggaagatctgagaaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aggtgagaaaaataacacaaatttggctgggcttggaactggggaagatctgagaaggtt 378
Query: 181 tggggaagtggtaagcatatgattgaaaaatattttatgaaaaaaagttatggttaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggggaagtggtaagcatatgattgaaaaatattttatgaaaaaaagttatggttaattc 318
Query: 241 ttgaaaagttgtagatgaattttaacccagaaaccttgctactgttccaagaagtcacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttgaaaagttgtagatgaattttaacccagaaaccttgctactgttccaagaagtcacat 258
Query: 301 ccagaggccttctagctctgtatgatcctcctagaatgacacacgtttaatccctctgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ccagaggccttctagctctgtatgatcctcctagaatgacacacgtttaatccctctgac 198
Query: 361 tggaatacacatccttagtaactctaaatgacatacagactcatcctttctacacaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tggaatacacatccttagtaactctaaatgacatacagactcatcctttctacacaacct 138
Query: 421 taattccaaaacaaggcatctaaatgaggttcagtcatgagtcagagaaagaatgacaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 taattccaaaacaaggcatctaaatgaggttcagtcatgagtcagagaaagaatgacaga 78
Query: 481 atgatttcaagacaggatattcccatcccacaggagaaccgagagtaagaggaactactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 atgatttcaagacaggatattcccatcccacaggagaaccgagagtaagaggaactactt 18
Query: 541 aagagtatgatatgata 557
|||||||||||||||||
Sbjct: 17 aagagtatgatatgata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_f02.g1 MSMg01no531_f02.g1 CHROMAT_FILE:
MSMg01no531_f02.g1 PHD_FILE: MSMg01no531_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:54 2005
(657 letters)
>mm_chr6_74206670_74207726
Length = 1057
Score = 1087 bits (562), Expect = 0.0
Identities = 627/660 (95%), Gaps = 19/660 (2%)
Strand = Plus / Plus
Query: 1 acaatacctgcactgcatgtcttaaaaatggtaaagccaacaacaatcccagcatggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 acaatacctgcactgcatgtcttaaaaatggtaaagccaacaacaatcccagcatggatg 257
Query: 61 gagggagggctcataaagtccaacccttatttaagggcctattggtcacctactgctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gagggagggctcataaagtccaacccttatttaagggcctattggtcacctactgctgct 317
Query: 121 gggggaagaagaatcaattttcatcagagatactgtctctgagaaactacccatgct--- 177
| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 318 agaggaagaagaatcaattttcatcagagatattgtctctgagaaactaccaatgctgca 377
Query: 178 gcagtacacatacactcatacacatataaatagaactaaatggacccagtaggtctcaga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcagtacacatacactcatacacatataaatagaactaaatggacccagtaggtctcaga 437
Query: 238 aaaggatcttgaaactgttagcgaaaatggtgtgagactagtagaggatctggagtggaa 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 438 aaaggatcttgaaactgttagcgaaaatggtgtgagactagtagaggatctggaggggaa 497
Query: 298 gagatggggtctgcatctagtatttggaacccaatacagtgctaaaaacaaggatatact 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gagatggggtctgcatctagtatttggaacccaatacagtgctaaaaacaaggatatact 557
Query: 358 gcatgagccaccaagatacaaatgcaaaagcacagatataaagaagtcctttccttagga 417
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcatgagccaccaagacacaaatgcaaaagcacagatataaagaagtcctttccttagga 617
Query: 418 aagaaacaaggaaggctcgtattttgtctcacaaaataaatgtgtcttaatagaaacaaa 477
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aagaaacaaagaaggctcgtactttgtctcacaaaataaatgtgtcttaatagaaacaaa 677
Query: 478 gaggcattgatgtgttctaccctgttataaccatgaaggcatccaggaaaagaaagaaca 537
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gaggcatttatgtgttctaccctgttataaccatgaaggcatccaggaaaagaaagaaca 737
Query: 538 cacagtaaactgcacagctctgcagcagtaacaggagaccacacacagaaccctgtattt 597
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 738 ----------------gctctgcagcagtaataggagaccacacacagaaccctgtattt 781
Query: 598 ccaagagtggagatgaagcaagagattgactggtgtcagaaatgtggttcaatttctgtt 657
| ||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 782 ctaagagtggagatgaaacaagagattgactgctgttagaaatgtggttcaatttctgtt 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
