Query= MSMg01no531_p13.b1 MSMg01no531_p13.b1 CHROMAT_FILE:
MSMg01no531_p13.b1 PHD_FILE: MSMg01no531_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:46 2005
(680 letters)
>mm_chr6_110074028_110075107
Length = 1080
Score = 1183 bits (612), Expect = 0.0
Identities = 657/672 (97%), Gaps = 2/672 (0%)
Strand = Plus / Plus
Query: 9 tccctcttcttcctccccaacttcttgatgcccccctcactcctctggctgacagtagtc 68
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 209 tccctcttcttcctccccaacttcttgatgcccccatcactcctctggctgacagtagtc 268
Query: 69 ctgccctagtctctctttttcccagctattggctgatcagcttttattgacaagtcagag 128
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 269 ctgccctagtctctctttttcccaactattggctgatcagcttttattgacaagtcagag 328
Query: 129 agtaaatgagaaacaatgtttacacaaacttgaaacaggtgatacttagaatgccattac 188
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agtaaatgagaaacgatgtttacacaaacttgaaacaggtgatacttagaatgccattac 388
Query: 189 aatgcaatttccaagaatgggagcagagaaataggcaattggtacaaggataatcttcac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aatgcaatttccaagaatgggagcagagaaataggcaattggtacaaggataatcttcac 448
Query: 249 acagtgcaaaaatcaaccaaacaaacaaacaaaaatcatgcctacagaagagcaaatctc 308
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 449 acagtgcaaaaatcaaccaaccaaacaaacaaaaatcatgcctacagaagagcaaatctc 508
Query: 309 tttgaaaataatcaagcacttattgtttttttgactataagtgaatcattcactactctt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tttgaaaataatcaagcacttattgtttttttgactataagtgaatcattcactactctt 568
Query: 369 tccttagtacataaattctacttgattcagattgtaaagttgatagataaaaaataagtt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tccttagtacataaattctacttgattcagattgtaaagttgatagataaaaaataagtt 628
Query: 429 aacaagagaatgaaagaaagatataataaagatcattgggtgaaactcccttccacaacc 488
||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct: 629 aacaagagaatgaaagaaataaataataaagatcattgggtgaaacttccttccacaacc 688
Query: 489 ctttcaccatccaccatccccctttcctctgagcaaatggtgaacccttggttatgcccc 548
|||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 689 ttttccccatccaccatcccc-tttcctctgagcgaatggtgaacccttggttatgcccc 747
Query: 549 ctcattctggcacaccaagtctctttgtggctaggtgcatcattctttcccactaaggcc 608
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 -tcattctggcacaccaagtctctttgtggctaggtgcatcattctttcccactaaggcc 806
Query: 609 agacaatacagcccagttagaagaacatatcccacagacaggtaacagcttttgggatag 668
|| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 807 agccaatacagcccagttagaagaacatatcccacagacaggcgacagcttttgggatag 866
Query: 669 ccactgttccag 680
||||||||||||
Sbjct: 867 ccactgttccag 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_p13.g1 MSMg01no531_p13.g1 CHROMAT_FILE:
MSMg01no531_p13.g1 PHD_FILE: MSMg01no531_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:46 2005
(642 letters)
>mm_chr6_110251130_110252171
Length = 1042
Score = 603 bits (312), Expect = e-176
Identities = 318/320 (99%)
Strand = Plus / Minus
Query: 1 atataagagagaaagagaagtgagtctggcgagttatactttgatctccacacacatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320 atataagagagaaagagaagtgagtctggcgagttatactttgatctccacacacttgaa 261
Query: 61 tgtgtggtatgaacctgcaggcatgtttactcatacatgcatacaagcaaaatattttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtgtggtatgaacctgcaggcatgtttactcatacatgcatacaagcaaaatattttta 201
Query: 121 agccccatatgtaccagaggatggccttctatagcatctataggaggggaggcctttagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agccccatatgtaccagaggatggccttctatagcatctataggaggggaggcctttagt 141
Query: 181 cctgcgaaggcttgatgcctcagtgaaggggaatgctaggacagtgagatggatgtaggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 cctgcgaaggcttgatgcctcagtgaaggggaatgctaggacagtgagatggatgtaggt 81
Query: 241 gggtgggtgggtaagcaccctcacagaagcaggggaacagggataaaatagaggatttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gggtgggtgggtaagcaccctcacagaagcaggggaacagggataaaatagaggatttat 21
Query: 301 ggaggggtatcctggaaggg 320
||||||||||||||||||||
Sbjct: 20 ggaggggtatcctggaaggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
