Query= MSMg01no532_d23.b1 MSMg01no532_d23.b1 CHROMAT_FILE:
MSMg01no532_d23.b1 PHD_FILE: MSMg01no532_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:07 2005
(614 letters)
>mm_chr6_143736986_143737999
Length = 1014
Score = 1168 bits (604), Expect = 0.0
Identities = 607/608 (99%)
Strand = Plus / Plus
Query: 5 gaattccaggcaggcttcggccacatatagaaacactttcccataaaactgcacaaagta 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggcaggcttgggccacatatagaaacactttcccataaaactgcacaaagta 264
Query: 65 aatactgaaataaaaagcttatttttagcaaagaacagatactcacaaagctagaactgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatactgaaataaaaagcttatttttagcaaagaacagatactcacaaagctagaactgg 324
Query: 125 taagtagaattaaggcataggaaataatatttatggtagaattctatagcaaaataatct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taagtagaattaaggcataggaaataatatttatggtagaattctatagcaaaataatct 384
Query: 185 cttaggcctatttgtcagtgtgactgtaagactccagggagccttagcttactggggacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttaggcctatttgtcagtgtgactgtaagactccagggagccttagcttactggggacc 444
Query: 245 ccctgagtgaaccacgtggagccaggatcgatgcaaaaagcaagaggaatttattgttcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccctgagtgaaccacgtggagccaggatcgatgcaaaaagcaagaggaatttattgttcc 504
Query: 305 agtgcactggggtcctcctagacccaaaggagaggcagtgacccccaggacccgttcagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtgcactggggtcctcctagacccaaaggagaggcagtgacccccaggacccgttcagt 564
Query: 365 gagttttttatatggtttccaggggcagaacagaacatcagcaactaggcacaatatgat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagttttttatatggtttccaggggcagaacagaacatcagcaactaggcacaatatgat 624
Query: 425 tggcagaacagtgcaccctttaaactgattggtctttagggaatgaggtgacaaggactt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggcagaacagtgcaccctttaaactgattggtctttagggaatgaggtgacaaggactt 684
Query: 485 cccttgtctgaaagtgagcaatggtcagccctgggggatgtgttcccacccacaggtctg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cccttgtctgaaagtgagcaatggtcagccctgggggatgtgttcccacccacaggtctg 744
Query: 545 ttcctgccctgtggtctgagaaatgctaattagtctctcccttctggagaggttagtgtt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttcctgccctgtggtctgagaaatgctaattagtctctcccttctggagaggttagtgtt 804
Query: 605 tcatgacc 612
||||||||
Sbjct: 805 tcatgacc 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_d23.g1 MSMg01no532_d23.g1 CHROMAT_FILE:
MSMg01no532_d23.g1 PHD_FILE: MSMg01no532_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:07 2005
(567 letters)
>mm_chr6_143911154_143912120
Length = 967
Score = 890 bits (460), Expect = 0.0
Identities = 466/468 (99%), Gaps = 2/468 (0%)
Strand = Plus / Minus
Query: 101 ccttctattccccctacccttctctctcttcctttctatctccctttctcttcctgtatc 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 ccttctattccccctacccttctctctcttcctttctatctccctttctcttcctgtatc 908
Query: 161 cctctctacctctgtctctatccttctctctcctctctcttccactgtctctctccctct 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 cctctctacctctgtctctatccttctctctcctctctcttccactgtctctctccctct 848
Query: 221 ttccctccctctgctctcctccatttgctttcttctcattcattcattcctccctccctc 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ttccctccctctgctctcctccatttgctttcttctcattcattcattcctccctccctc 788
Query: 281 cctccttccctccctccctcatcctgaccctgacccctcatgtgaaccagccagtcttag 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cctccttccctccctccctcatcctgaccctgacccctcatgtgaaccagccagtcttag 728
Query: 341 atatttaagcccagaggtttattgtggcaaatgaaacgaaggagaagccagaggtgagct 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atatttaagcccagaggtttattgtggcaaatgaaacgaaggagaagccagaggtgagct 668
Query: 401 tttaaagcaagaactgtgagaagcatgtgcaccttatgtgcaccttcggattcctagggg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tttaaagcaagaactgtgagaagcatgtgcaccttatgtgcaccttcggattcctagggg 608
Query: 461 tggtgaacagcagtgagacgcaggctgaggtgcgccacagggatcacggaatcttggttt 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tggtgaacagcagtgagacgcaggctgaggtgcgccacagggatcacggaatcttggttt 548
Query: 521 tcttggtgatcatatcctgactngc-aagctcaactccacacacatag 567
|||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 547 tcttggtgatcatatcctgact-gccaagctcaactccacacacatag 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
