Query= MSMg01no532_h22.b1 MSMg01no532_h22.b1 CHROMAT_FILE:
MSMg01no532_h22.b1 PHD_FILE: MSMg01no532_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:25 2005
(619 letters)
>mm_chr6_100445884_100446902
Length = 1019
Score = 1129 bits (584), Expect = 0.0
Identities = 607/615 (98%)
Strand = Plus / Plus
Query: 5 gaattccaggataatctcggctacagggaaaaaccctatctcaaggaaatgtaataatat 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggataatcagggctacagggaaaaaccctatctcaaggaaatgtaataatat 264
Query: 65 tattaataacaatctaattttaattaatttaatatgacaagactaatacattgtaaagca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tattaataacaatctaattttaattaatttaatatgacaagactaatacattgtaaagca 324
Query: 125 atgaaagaaaataagagtttcaaggtgcatgccttggaatcccaggtacacaggaggctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgaaagaaaataagagtttcaaggtgcatgccttggaatcccaggtacacaggaggctg 384
Query: 185 aggcaaaaggagcaccagggcttggaggccagcctgggctacattccaactcaaccaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggcaaaaggagcaccagggcttggaggccagcctgggctacattccaactcaaccaaag 444
Query: 245 ccaaaaacaaaataaaaagacctgggtttcagagtcagtgcaaggctagctagctaaggc 304
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccaaaaacaaaataaaaaaacctgggtttcagagtcagtgcaaggctagctagctaaggc 504
Query: 305 agcagtgagccctgtcttaaaataaaaaggaggtctgggacatgggccagtgatacagca 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 agcagtgagccctgtcttaaaataagaaggaggtctgggacatgggccagtgatacagca 564
Query: 365 tttgtgtcagtttctagtgatgtgaccatctcaaataaaatatatacatgtgttatatac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgtgtcagtttctagtgatgtgaccatctcaaataaaatatatacatgtgttatatac 624
Query: 425 agaaactcctcataggaaatgttgctggtgctccaaccttacccaggtggcttcattagt 484
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 625 agaaactcctcataggaaatgttgctggtgctccgaccttacccaggtggcttcattagt 684
Query: 485 cctgggtccatgcccatagcagccctcagccaggctggccactttagaaagtgctcctgg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctgggtccatgcccatagcagccctcagccaggctggccactttagaaagtgctcctgg 744
Query: 545 ggcatggtcctgacctgnggcctttgcacctatgttaacagctgtgtagcttggtcctct 604
||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 745 ggcatggccctgacctggggcctttgtacctatgttaacagctgtgtagcttggtcctct 804
Query: 605 tgtgcgactcctaac 619
|||||||||||||||
Sbjct: 805 tgtgcgactcctaac 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_h22.g1 MSMg01no532_h22.g1 CHROMAT_FILE:
MSMg01no532_h22.g1 PHD_FILE: MSMg01no532_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:26 2005
(578 letters)
>mm_chr6_100635478_100636456
Length = 979
Score = 721 bits (373), Expect = 0.0
Identities = 413/437 (94%), Gaps = 21/437 (4%)
Strand = Plus / Minus
Query: 143 ggcagatctctgaatttaaagccagcctggtctacagagtaagttctaggacagccaggg 202
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 ggcagatctctaaatttaaagccagcctggtctacagagtaagttctaggacagccaggg 920
Query: 203 tcacacaaagaaactctgtctccaaaaccaaccaaccaaccaaccaaccaaacaaactaa 262
|||||||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 919 tcacacaaagaaactctgtctccaaaaccaaccaaccaacta---aa-caaacaaactaa 864
Query: 263 ctaactaactaactaactaactaactaactaactaagcagatagtttctaaggaatgaca 322
|||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 863 ctaactaactaa-------------t---taactaagcagatagtttctaaggaatgaca 820
Query: 323 tccaaggttgtctcttggcttctattcacatgtgcacacatgtgcacctgaacacacatg 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tccaaggttgtctcttggcttctattcacatgtgcacacatgtgcacctgaacacacatg 760
Query: 383 agcatttacatagtaatatgggaaaatcagagtggaaaagagagcaaggagcaaacgaga 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 agcatttacatagtaatatgggaaaatcagagtggaaaagagagcaaggagcaaacgaga 700
Query: 443 tgggaagaaggccccagaactgcttggacactgcaattggcagtagggtaattgctacct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tgggaagaaggccccagaactgcttggacactgcaattggcagtagggtaattgctacct 640
Query: 503 gcatttgtctcaccagggcctcttacttgaaggatttgtctttagtctgg-aaaaaggtg 561
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 639 gcatttgtctcaccagggcctcttacttgaaggatttgtctttagtctggaaaaaaggtg 580
Query: 562 actcatgtggacgattc 578
||||||||| |||||||
Sbjct: 579 actcatgtgaacgattc 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 979
Length adjustment: 10
Effective length of query: 568
Effective length of database: 969
Effective search space: 550392
Effective search space used: 550392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
