Query= MSMg01no533_k10.b1 MSMg01no533_k10.b1 CHROMAT_FILE:
MSMg01no533_k10.b1 PHD_FILE: MSMg01no533_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:55 2005
(538 letters)
>mm_chr6_88743776_88744712
Length = 937
Score = 967 bits (500), Expect = 0.0
Identities = 524/532 (98%), Gaps = 1/532 (0%)
Strand = Plus / Minus
Query: 7 gaattcagcatatgttctatggaaacacatctcaacttagattttttttttaagctgtta 66
|||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 737 gaattcagcatatgggctatggaaacacatctcaacttaga-tttttttttaagctgtta 679
Query: 67 caacatgctttataatgtaaccaactaaaaggctgttatcggtgcgcattttcagagtcg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 caacatgctttataatgtaaccaactaaaaggctgttatcggtgcgcattttcagagtcg 619
Query: 127 tgcattctcagaattttgtatttagaggatttatttgaaaacatcctacactccactgta 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgcattctcagaattttgtatttagaggatttatttgaaaacatcctacactccactgta 559
Query: 187 taaataagaggaaacaacatgacaaagagcgtcacaacagcttggtgtctagcaggacca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 taaataagaggaaacaacatgacaaagagcgtcacaacagcttggtgtctagcaggacca 499
Query: 247 gcttccttttgtgtcgtgctataggatggcagtttggaggacaagggagacaggatctat 306
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 gcttccttttgtgtcgtgctataggatggcagtttggaggacaagggaggcaggatctat 439
Query: 307 gggatgggcagtcacgaatccatgtgccgtgcgtatccaggcttctctcccattctcttt 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gggatgggcagtcacgaatccatgtgccgtgcgtatccaggcttctctcccattctcttt 379
Query: 367 tatgaaatggcgaggctctgggcaattgtgggggcctgccaaaatcacccccgaaagcta 426
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tataaaatggcgaggctgtgggcaattgtgggggcctgccaaaatcacccccgaaagcta 319
Query: 427 tccctgtggctcacatctctcaatgaacatggctctggctcccgagccagcagcagctgt 486
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 318 tccctgtggctcacatctctcaatgaatatggctctggctcccgagccagcagcagctgt 259
Query: 487 gaggtggagaggcgtgtaccactagaaacttccaggatgcgatgcatcaagg 538
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 258 gaggtggagaggcgtataccactagaaacttccaggatgcgatgcatcaagg 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_k10.g1 MSMg01no533_k10.g1 CHROMAT_FILE:
MSMg01no533_k10.g1 PHD_FILE: MSMg01no533_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:55 2005
(647 letters)
>mm_chr6_88663804_88664849
Length = 1046
Score = 1189 bits (615), Expect = 0.0
Identities = 639/647 (98%), Gaps = 1/647 (0%)
Strand = Plus / Plus
Query: 1 tttgctttgccttgtcatgatgttgatgagcatcacactctgctcagggagagtctttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgctttgccttgtcatgatgttgatgagcatcacactctgctcagggagagtctttat 260
Query: 61 acttcctgggctctgggtagctttgacagctgtccttagaacacacaacatgatgctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttcctgggctctgggtagctttgacagctgtccttagaacacacaacatgatgctcac 320
Query: 121 ttcttgaggggaaatagagttgccccctcaccgtcctcagaatcttccttcctcttcaga 180
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 321 ttcttgaggggaaatagagttgctccctcaccatcctcagaatcttccttcctcttcaga 380
Query: 181 tgagcaactcagagaatgcttgggtcgcttgttcacaatgacagagcattttcattcatc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tgagcaactcagagaatgcttgggtcacttgttcacaatgacagagcattttcattcatc 440
Query: 241 ttatgcatgcttcaagtcacattgcacctcccatgtcacacagctaacatgtaacctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatgcatgcttcaagtcacattgcacctcccatgtcacacagctaacatgtaacctgtg 500
Query: 301 ctgtgtcattggttggtgtactgcattggtaggaaacagcgacaggaagtgatttgtata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgtgtcattggttggtgtactgcattggtaggaaacagcgacaggaagtgatttgtata 560
Query: 361 tgttcagcatagacagacacagttccctccaacactgttggcccaacgttggttgaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgttcagcatagacagacacagttccctccaacactgttggcccaacgttggttgaattc 620
Query: 421 ttgaatggagagcctgggcacagggttgaatgtgcggttttcactttgcacgctaaacaa 480
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 621 ttgaatggagagcctgggcacagggttgactgtgcagttttcactttgcacgctaaacaa 680
Query: 481 actaaagaaaatagagatccatgtaaacctcttatgaatctgaaggctatgactcaggcc 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actaaagaaaatagagatccgtgtaaacctcttatgaatctgaaggctatgactcaggcc 740
Query: 541 tgtggcagggtgtgggtgaaaaccccaagccccccagttcctggtttttagcccatttcc 600
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtggcaag-tgtgggtgaaaaccccaagccccccagttcctggtttttagcccatttcc 799
Query: 601 cctatgaaatactgagaacctgttggcaagacaagagaacaatgtta 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cctatgaaatactgagaacctgttggcaagacaagagaacaatgtta 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1046
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1036
Effective search space: 659932
Effective search space used: 659932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
