NCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTGGAATTTTGGTCTCTTTGAAAAGCACAGAGACATTATAAGA
ATGTGTTCTCATTTTAATCCCAAGTATGGGGACTTGGGGCCGCCTCAGAC
TGTCCACAGCAGCTGACTAAGATTTGCTGGTGCTGTAGCTGAGGCAAGCA
TGCTTTGGCCAGCTGCAGATAGTTTCTGCAATTGTGTCATGTTTGCAATT
CTGGGAACTTTTCAGAGGGTACATAGGGAGGTTGGATGCAGTTTGTTAGT
ACCCATGGTCAAAGTAACAAGGGGAAATATGTTAAATTCAGGGATCTCTC
TCTCTCTCTCTCTCTCTCTCTCTTCTCCCCTCCCTCCCCTCCATGTTCCT
TTTTGTCCTATCTAGTGATAGCTGGTGAAACCAGGGATGGGTGGGGNGTG
GGATGGGGGAGGNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

TACAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACCTGAAGCTTTAGCATTTTCAACA
TAAACACGTTGTAGCTTGGCATCCTGAAACACATAGATGAGGAAGAGAAG
AATACAAGCCACAGGCATCAATAAACACTGCTACTGGGATTTGACTCGAG
GGAGGGAACTGAATTGTTTGAAGCCAGGCATCAGAGGAGGCAAATGTTTC
CTGTAAAGCCCTTGTTGACTTTCGATTGGCTTTCTATAATGTACATATTT
AAGTTTCAAAAGTTATTTCAAATGTAAACTTATGATCCCATAAAGCTGCT
AATGTGGCTACCTTTGTGTGAAAGTATGGGGTTGGGCAAGGTTTTCCACT
CCCTATGCAACATGCTGTTTGCTAGTGAATGCTAGGATATGTTTCATAGG
CTTGGATGCAAAAATTAAAGTTAAAAAAATCACCCAGGCACACTGTATAT
GTGAATGAAATGTTTTAACAATTTCTGAGGTGGTATGAGGAGCACACGAA
GTTAAAACAATCAGAGGGCAACTTAGTCACTTGGTGTGAAAAGCAGCAGT
AAAAAACGTTTAGAGTTGCTTAGTGCTGTAGCACACCTGTAAGCCCTTCC
ACCCTATGAAAGTGGAGAAGGAGGTTTGCTAATTCAAGGCCAGCTTGGAC
TGCTACCCAGAAAGGCTGCCCAACCAAGCAACAGCGCCACAAAAATGTTA
ACAGAAAACACCTATTTCAAN

Query= MSMg01no535_n15.g1 MSMg01no535_n15.g1 CHROMAT_FILE:
MSMg01no535_n15.g1 PHD_FILE: MSMg01no535_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:47 2005
         (687 letters)



>mm_chr6_7163030_7164115
          Length = 1086

 Score = 1274 bits (659), Expect = 0.0
 Identities = 680/687 (98%), Gaps = 1/687 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctgaagctttagcattttcaacataaacacgttgtagcttggcatcctgaaacacata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 746 acctgaagctttagcattttcaacataaacacgttgtagcttggcatcctggaacacata 687

                                                                       
Query: 61  gatgaggaagagaagaatacaagccacaggcatcaataaacactgctactgggatttgac 120
           |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 686 gatgaggaagagaagaatacaagccacaggcatcgatacacactgctactgggatttgac 627

                                                                       
Query: 121 tcgagggagggaactgaattgtttgaagccaggcatcagaggaggcaaatgtttcctgta 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 626 tcgagggagggaactgaattgtttgaag-caggcatcagaggaggcaaatgtttcctgta 568

                                                                       
Query: 181 aagcccttgttgactttcgattggctttctataatgtacatatttaagtttcaaaagtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aagcccttgttgactttcgattggctttctataatgtacatatttaagtttcaaaagtta 508

                                                                       
Query: 241 tttcaaatgtaaacttatgatcccataaagctgctaatgtggctacctttgtgtgaaagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tttcaaatgtaaacttatgatcccataaagctgctaatgtggctacctttgtgtgaaagt 448

                                                                       
Query: 301 atggggttgggcaaggttttccactccctatgcaacatgctgtttgctagtgaatgctag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atggggttgggcaaggttttccactccctatgcaacatgctgtttgctagtgaatgctag 388

                                                                       
Query: 361 gatatgtttcataggcttggatgcaaaaattaaagttaaaaaaatcacccaggcacactg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gatatgtttcataggcttggatgcaaaaattaaagttaaaaaaatcacccaggcacactg 328

                                                                       
Query: 421 tatatgtgaatgaaatgttttaacaatttctgaggtggtatgaggagcacacgaagttaa 480
           |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 327 tatatgtgaatgaaatgttttaacaatttctgaggtagtatgaggagcacatgaagttaa 268

                                                                       
Query: 481 aacaatcagagggcaacttagtcacttggtgtgaaaagcagcagtaaaaaacgtttagag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aacaatcagagggcaacttagtcacttggtgtgaaaagcagcagtaaaaaacgtttagag 208

                                                                       
Query: 541 ttgcttagtgctgtagcacacctgtaagcccttccaccctatgaaagtggagaaggaggt 600
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 207 ttgcttagtgctgtagcacacctgtaagcccttccgccctatgaaagtggagaaggaggt 148

                                                                       
Query: 601 ttgctaattcaaggccagcttggactgctacccagaaaggctgcccaaccaagcaacagc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ttgctaattcaaggccagcttggactgctacccagaaaggctgcccaaccaagcaacagc 88

                                      
Query: 661 gccacaaaaatgttaacagaaaacacc 687
           |||||||||||||||||||||||||||
Sbjct: 87  gccacaaaaatgttaacagaaaacacc 61


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1086
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1076
Effective search space:   728452
Effective search space used:   728452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)